RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 HSP90AA4PQ58FG1 418 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 DEFB121Q5J5C9 76 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 OR10K2Q6IF99 312 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 FAM183BPQ6ZVS7 135 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 SYS1Q8N2H4 156 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 FAM19A2Q8N3H0 131 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 OR5D18Q8NGL1 313 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 OR6K2Q8NGY2 324 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 CYGBQ8WWM9 190 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 PGLYRP3Q96LB9 341 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 CIB1Q99828 191 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 ADAT1Q9BUB4 502 aaKnown RBP0.05□□□□□ -2.4
UBXN4-207ENST00000471246 CHST5Q9GZS9 411 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 OR51E2Q9H255 320 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 SYT4Q9H2B2 425 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 RMND1Q9NWS8 449 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 SNX12Q9UMY4 172 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 HHLA3Q9XRX5 114 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 ABCC8Q09428 1581 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 SNRNP200O75643 2136 aaKnown RBP0.05□□□□□ -2.4
UBXN4-207ENST00000471246 EIF2AK4Q9P2K8 1649 aaKnown RBP0.05□□□□□ -2.4
UBXN4-207ENST00000471246 LRPPRCP42704 1394 aaKnown RBP0.05□□□□□ -2.4
UBXN4-207ENST00000471246 RFX7Q2KHR2 1363 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 C5P01031 1676 aa0.05□□□□□ -2.4
UBXN4-207ENST00000471246 NLRP1Q9C000 1473 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MYO7BQ6PIF6 2116 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MAP2P11137 1827 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CPAMD8Q8IZJ3 1885 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MEIKINA0A087WXM9 373 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 A0A1W2PQD3 144 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MGAT4DA6NG13 374 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 TLCD2A6NGC4 264 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 M0R2T5 61 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 SLC17A3O00476 420 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CASC3O15234 703 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 POLR3GO15318 223 aaPredicted RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 ZMPSTE24O75844 475 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 VAPBO95292 243 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 SNAI1O95863 264 aaPredicted RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MBP02144 154 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 PTMSP20962 102 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 BGNP21810 368 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 NPPCP23582 126 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CD24P25063 80 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CRYBB3P26998 211 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 DEKP35659 375 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 OR1E2P47887 323 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 XCL1P47992 114 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 PSMB3P49720 205 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 ATP5J2P56134 94 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 ACTBP60709 375 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 TMEM258P61165 79 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 FGF12P61328 243 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CNBPP62633 177 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 FAM3AP98173 230 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 Q1T7F1 81 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 DEFB113Q30KQ7 82 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CENPWQ5EE01 88 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 TMEM42Q69YG0 159 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 XKRXQ6PP77 449 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 DRAM2Q6UX65 266 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 Q6ZT83 130 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 SLC35E3Q7Z769 313 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 RPP25LQ8N5L8 163 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CNEP1R1Q8N9A8 125 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 LFNGQ8NES3 379 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 FAM45AQ8TCE6 357 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 AGR3Q8TD06 166 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 TRNT1Q96Q11 434 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MIEN1Q9BRT3 115 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MED18Q9BUE0 208 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 TAS2R13Q9NYV9 303 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CCDC180Q9P1Z9 1646 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MROH2AA6NES4 1674 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CLTCQ00610 1675 aaKnown RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 SCN7AQ01118 1682 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 KIAA0232Q92628 1395 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 ROBO3Q96MS0 1386 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 MUC22E2RYF6 1773 aaPredicted RBP0.04□□□□□ -2.4
UBXN4-207ENST00000471246 TECPR2O15040 1411 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 PIK3C2GO75747 1445 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 CASKIN1Q8WXD9 1431 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 ANKRD50Q9ULJ7 1429 aa0.04□□□□□ -2.4
UBXN4-207ENST00000471246 SBF2Q86WG5 1849 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TAF1LQ8IZX4 1826 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 KIF13BQ9NQT8 1826 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TNRC6BQ9UPQ9 1833 aaKnown RBP0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ZNF518AQ6AHZ1 1483 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TANC1Q9C0D5 1861 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 PLXNC1O60486 1568 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 MYO3AQ8NEV4 1616 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 ALS2Q96Q42 1657 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 GOLGA6L7A0A1B0GV03 622 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 LINC00862A6NCI5 91 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 TRIM64CA6NLI5 447 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 A6NN06 94 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 OR11H12B2RN74 326 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 E7EWF7 191 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 LYNX1G3V0Z9 82 aa0.03□□□□□ -2.4
UBXN4-207ENST00000471246 H0YIV9 168 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms