RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SHISA2Q6UWI4 295 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 RBMS3Q6XE24 437 aaKnown RBP7.36□□□□□ -1.23
PTPRE-207ENST00000471218 OR1S2Q8NGQ3 325 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 NANPQ8TBE9 248 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 ATP5SQ99766 215 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 RBKSQ9H477 322 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 NARFLQ9H6Q4 476 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 ENY2Q9NPA8 101 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 PSENENQ9NZ42 101 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 NUP50Q9UKX7 468 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 TCF19Q9Y242 345 aa7.36□□□□□ -1.23
PTPRE-207ENST00000471218 IGSF23A1L1A6 192 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 CEBPZOSA8MTT3 80 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 RNASEK-C17orf49H0YIS7 233 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 MPDU1O75352 247 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 MOSP00540 346 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 IGLV2-23P01705 113 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 OR9G9P0C7N8 305 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 COX7A1P24310 79 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 BRS3P32247 399 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 HTR2BP41595 481 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 VDAC2P45880 294 aaPredicted RBP7.35□□□□□ -1.23
PTPRE-207ENST00000471218 F2RL1P55085 397 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 RPS16P62249 146 aaKnown RBP7.35□□□□□ -1.23
PTPRE-207ENST00000471218 PRR31Q5SQ13 230 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 NPBQ8NG41 125 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 SAT2Q96F10 170 aaPredicted RBP7.35□□□□□ -1.23
PTPRE-207ENST00000471218 TBX15Q96SF7 602 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 GINS3Q9BRX5 216 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 COMMD5Q9GZQ3 224 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 MAGT1Q9H0U3 335 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 PLEKHA3Q9HB20 300 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 SIRT7Q9NRC8 400 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 OR51B2Q9Y5P1 312 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 DOCK11Q5JSL3 2073 aa7.35□□□□□ -1.23
PTPRE-207ENST00000471218 LINC00862A6NCI5 91 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 TIMM23O14925 209 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 NDUFA3O95167 84 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 IFNA5P01569 189 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 CRYGBP07316 175 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 LINC00205P59089 165 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 RAB11AP62491 216 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 PRSS8Q16651 343 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 VWC2Q2TAL6 325 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 BSXQ3C1V8 233 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 DPPA3Q6W0C5 159 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 MOB3BQ86TA1 216 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 ZNF114Q8NC26 417 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 OR10P1Q8NGE3 313 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 OR5C1Q8NGR4 320 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 OR2T10Q8NGZ9 312 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 RNF141Q8WVD5 230 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 CFHR4Q92496 578 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 PSMG3Q9BT73 122 aaPredicted RBP7.34□□□□□ -1.23
PTPRE-207ENST00000471218 ZNF747Q9BV97 191 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 TMEM147Q9BVK8 224 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 QTRT1Q9BXR0 403 aaKnown RBP7.34□□□□□ -1.23
PTPRE-207ENST00000471218 NDUFA4L2Q9NRX3 87 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 KCNIP2Q9NS61 270 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 C1RLQ9NZP8 487 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 ZNRD1Q9P1U0 126 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 AUP1Q9Y679 476 aa7.34□□□□□ -1.23
PTPRE-207ENST00000471218 TENM1Q9UKZ4 2725 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 IGHV1-69DA0A0B4J2H0 117 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 RPS10-NUDT3A0A1W2PQS6 291 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 FAM24AA6NFZ4 105 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SRRM4A7MD48 611 aaKnown RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 NPFFO15130 113 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 ACTL6BO94805 426 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 CFDP00746 253 aaPredicted RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 IGHV1-69P01742 117 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SNRNP70P08621 437 aaKnown RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 FAM106CPP0CH98 169 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SPP1P10451 314 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 REG1BP48304 166 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 HOXA1P49639 335 aaPredicted RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SUB1P53999 127 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 OR2B8PP59922 312 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 DLK1P80370 383 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 ERHP84090 104 aaKnown RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SERF2P84101 59 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 IZUMO4Q1ZYL8 232 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 C2orf83Q53S99 150 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SPANXN5Q5MJ07 72 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 RPL7L1Q6DKI1 246 aaKnown RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SSX9Q7RTT3 188 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 CENPVQ7Z7K6 275 aaPredicted RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 PDZD9Q8IXQ8 264 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 Q8N6K4 173 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 OR1L6Q8NGR2 347 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 CACNG8Q8WXS5 425 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 HEYLQ9NQ87 328 aaPredicted RBP7.33□□□□□ -1.24
PTPRE-207ENST00000471218 MMP26Q9NRE1 261 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 KIAA1456Q9P272 454 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 SIGLEC9Q9Y336 463 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 TIMM9Q9Y5J7 89 aa7.33□□□□□ -1.24
PTPRE-207ENST00000471218 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
PTPRE-207ENST00000471218 CORTO00230 105 aa7.32□□□□□ -1.24
PTPRE-207ENST00000471218 RRHO14718 337 aa7.32□□□□□ -1.24
PTPRE-207ENST00000471218 FGF16O43320 207 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms