RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ZNF695Q8IW36 515 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF555Q8NEP9 628 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 OR10D4PQ8NGN7 298 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 TERB2Q8NHR7 220 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 FNDC9Q8TBE3 224 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 MRPL30Q8TCC3 161 aaKnown RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF721Q8TF20 911 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF418Q8TF45 676 aaPredicted RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 C7orf33Q8WU49 177 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 RTN4IP1Q8WWV3 396 aaPredicted RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 AP1S3Q96PC3 154 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 TRIB3Q96RU7 358 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 NRIP2Q9BQI9 281 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF471Q9BX82 626 aaPredicted RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 WDR61Q9GZS3 305 aaKnown RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 CST9LQ9H4G1 147 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 CA10Q9NS85 328 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 OR5AC2Q9NZP5 309 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 ZFP30Q9Y2G7 519 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 MIA3Q5JRA6 1907 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 THSD7AQ9UPZ6 1657 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 SIGLEC1Q9BZZ2 1709 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 ADAMTSL1Q8N6G6 1762 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF609O15014 1411 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 TRBV20OR9-2A0A075B6H5 130 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 TRAV9-1A0A075B6T8 112 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 DPRXA6NFQ7 191 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 A8MUN3 132 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 IFNA17P01571 189 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 IGLV3-27P01718 113 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 UCHL1P09936 223 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 CXCL12P48061 93 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 DAPP51397 102 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 COPZ1P61923 177 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 RPS11P62280 158 aaKnown RBP eCLIP3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 HBA1P69905 142 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 PSG7Q13046 419 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 LINC00303Q3SY05 128 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 LINC01551Q86U37 167 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 PDPNQ86YL7 162 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 C8orf59Q8N0T1 100 aaPredicted RBP3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 TCTEX1D1Q8N7M0 179 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF709Q8N972 641 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 OR52R1Q8NGF1 315 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 OR4C16Q8NGL9 310 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 OR5H2Q8NGV7 314 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 FAM57AQ8TBR7 257 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 SLAMF6Q96DU3 332 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 BORCS8Q96FH0 119 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 SLC25A21Q9BQT8 299 aaPredicted RBP3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 RTL8AQ9BWD3 113 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 GGTLC1Q9BX51 225 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 PLEKHF2Q9H8W4 249 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 TAC3Q9UHF0 121 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 AK3Q9UIJ7 227 aa3.13□□□□□ -1.91
PRPF40A-206ENST00000471167 PDS5BQ9NTI5 1447 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 IGHV1-45A0A0A0MS14 117 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 TRAV38-1A0A0B4J264 116 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 IGKV6-21A0A0C4DH24 114 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 GABARAPH6UMI1 98 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 J3QQQ9 107 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 M0R143 59 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 LTAP01374 205 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 IGHV3-23P01764 117 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 HLA-DQB1P01920 261 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 SEC11BP0C7V7 166 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 INAFM2P0DMQ5 153 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 MDKP21741 143 aaPredicted RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 FKBP2P26885 142 aaKnown RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 EIF2B2P49770 351 aaKnown RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 GTF3C1Q12789 2109 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 EIF3IQ13347 325 aaKnown RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 RTL8BQ17RB0 113 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 Q5XG85 94 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 TEX261Q6UWH6 196 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 IGFL3Q6UXB1 125 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 ACBD7Q8N6N7 88 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 NPBQ8NG41 125 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 SGMS2Q8NHU3 365 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 RAB2BQ8WUD1 216 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 HIST1H2BAQ96A08 127 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 TMEM106AQ96A25 262 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 C16orf74Q96GX8 76 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 GPX7Q96SL4 187 aaPredicted RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 SPIN2AQ99865 258 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 SPIN2BQ9BPZ2 258 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 PSMG3Q9BT73 122 aaPredicted RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 AICDAQ9GZX7 198 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 SND1-IT1Q9HBX3 110 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF492Q9P255 531 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 DEC1Q9P2X7 70 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 NAT8Q9UHE5 227 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 MCTS1Q9ULC4 181 aaKnown RBP3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 KIF13BQ9NQT8 1826 aa3.12□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF106Q9H2Y7 1883 aaKnown RBP3.11□□□□□ -1.91
PRPF40A-206ENST00000471167 FMN1Q68DA7 1419 aa3.11□□□□□ -1.91
PRPF40A-206ENST00000471167 RAPGEF2Q9Y4G8 1499 aa3.11□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF705DP0CH99 300 aaPredicted RBP3.11□□□□□ -1.91
PRPF40A-206ENST00000471167 OPRM1P35372 400 aa3.11□□□□□ -1.91
PRPF40A-206ENST00000471167 RBMXP38159 391 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms