RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 C9orf170A2RU37 121 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 DBX1A6NMT0 343 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 NPIPB5A8MRT5 1133 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 DUS4LO95620 317 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 DEFA6Q01524 100 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 ANKRD55Q3KP44 614 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 LYG2Q86SG7 212 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 TTC9CQ8N5M4 171 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 OR4A16Q8NH70 328 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 RNASE11Q8TAA1 199 aaKnown RBP11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 SLA2Q9H6Q3 261 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 NSG2Q9Y328 171 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 OR51B2Q9Y5P1 312 aa11.66□□□□□ -0.54
CDC42SE1-203ENST00000470278 A0A0B4J293 547 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 TEX50A0A1B0GTY4 177 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 TCRBV4S1A1TA0A5B7 111 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 ADARB2-AS1A8MUL3 147 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 CRYGCP07315 174 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 MYOD1P15172 320 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 RAB25P57735 213 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 C2orf68Q2NKX9 166 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 C4orf46Q504U0 113 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 NRARPQ7Z6K4 114 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
CDC42SE1-203ENST00000470278 TRAV6A0A075B6T7 132 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 RPLP1P05386 114 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 H2AFB2P0C5Z0 115 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 RAB9AP51151 201 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 RPL23AP62750 156 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 KLK9Q2XQG4 91 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 TMEM65Q6PI78 240 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 COQ8AQ8NI60 647 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 CASTOR1Q8WTX7 329 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 KLK9Q9UKQ9 250 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
CDC42SE1-203ENST00000470278 HMX3A6NHT5 357 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 M0QZ24 198 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 PTTG1O95997 202 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 APELAP0DMC3 54 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 PF4V1P10720 104 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 SLC25A6P12236 298 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 AREGP15514 252 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 CTRB1P17538 263 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 PSMB6P28072 239 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 CDX1P47902 265 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 HSPE1P61604 102 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 Q6ZRM9 215 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 LYZL2Q7Z4W2 148 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 MRPL41Q8IXM3 137 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR52E5Q8NH55 327 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 MITD1Q8WV92 249 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 KLK15Q9H2R5 256 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 CACNG5Q9UF02 275 aa11.63□□□□□ -0.55
CDC42SE1-203ENST00000470278 A0A1B0GU03 582 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 ST8SIA3O43173 380 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 RBMXL2O75526 392 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 DHFRP00374 187 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 WT1-ASQ06250 92 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 KIAA0141Q14154 515 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 KHDC1LQ5JSQ8 128 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 PLET1Q6UQ28 207 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 LCNL1Q6ZST4 164 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 ZNF491Q8N8L2 437 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR5T1Q8NG75 326 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 MARVELD1Q9BSK0 173 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 PDCD10Q9BUL8 212 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 DNAH3Q8TD57 4116 aa11.62□□□□□ -0.55
CDC42SE1-203ENST00000470278 TRBV9A0A0B4J1U6 114 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 IL5P05113 134 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 TPPP2P59282 170 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 DCTN2Q13561 401 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 SMCO1Q147U7 214 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 ZNF114Q8NC26 417 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 OR10W1Q8NGF6 305 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 ZNF431Q8TF32 576 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 C4orf3Q8WVX3 66 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 PLEKHA3Q9HB20 300 aa11.61□□□□□ -0.55
CDC42SE1-203ENST00000470278 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 PRAF2O60831 178 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 TRGV3P03979 118 aa11.6□□□□□ -0.55
CDC42SE1-203ENST00000470278 HIST1H1BP16401 226 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms