RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 FAM90A14PP0C7W9 464 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 FAM90A24PP0C7X0 464 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 FOXE3Q13461 319 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 HES1Q14469 280 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 EDDM3AQ14507 147 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 PEA15Q15121 130 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 HMGN3Q15651 99 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 DEFB136Q30KP8 78 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 AKIRIN2Q53H80 203 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 SLC25A26Q70HW3 274 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 BATF2Q8N1L9 274 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 ZNF565Q8N9K5 539 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 UBAC2Q8NBM4 344 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 SLAMF9Q96A28 289 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 SPIN2AQ99865 258 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 SPIN2BQ9BPZ2 258 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 SPATA25Q9BR10 227 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 ARV1Q9H2C2 271 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 GAL3ST2Q9H3Q3 398 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 WFDC1Q9HC57 220 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 SLC2A9Q9NRM0 540 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 LINC00527Q9UJ94 153 aa6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 UBE2J1Q9Y385 318 aaPredicted RBP6.96□□□□□ -1.3
SYNGAP1-205ENST00000470232 PQLC2LA1A4F0 135 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 BUB1B-PAK6H3BSN5 160 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 MPPED1O15442 326 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 ZNF737O75373 536 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR7C1O76099 320 aaPredicted RBP6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 PPYP01298 95 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 PRH1P02810 166 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 CD5P06127 495 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR8U9P0C7N5 309 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 SEC11BP0C7V7 166 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 GP9P14770 177 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 TMEM11P17152 192 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 BCL3P20749 454 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 RND3P61587 244 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 VAMP2P63027 116 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 ZNF616Q08AN1 781 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 GNMTQ14749 295 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 TPTE2P1Q5T6R2 138 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 SAXO1Q8IYX7 474 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 C5orf56Q8N8D9 126 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR11H1Q8NG94 326 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 NEK7Q8TDX7 302 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 RPEQ96AT9 228 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 GINS3Q9BRX5 216 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 HES4Q9HCC6 221 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 BIN3Q9NQY0 253 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 TMED3Q9Y3Q3 217 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 DSCAML1Q8TD84 2053 aa6.95□□□□□ -1.3
SYNGAP1-205ENST00000470232 TRGV10A0A0A0MS01 117 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 C3orf85A0A1B0GTC6 90 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 FAM90A9PA6NNJ1 464 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 SAP30O75446 220 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 IGLV1-47P01700 117 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 NFYBP25208 207 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 NPBWR2P48146 333 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 RAB5CP51148 216 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 AKR1D1P51857 326 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 EWSR1Q01844 656 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 FHL3Q13643 280 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 GUK1Q16774 197 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 HLA-DRB5Q30154 266 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 SPIN3Q5JUX0 258 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 HEPN1Q6WQI6 88 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 SLC35G3Q8N808 338 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR52M1Q8NGK5 317 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 OR4D5Q8NGN0 318 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 GLYATL2Q8WU03 294 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 SECTM1Q8WVN6 248 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 RBMXL1Q96E39 390 aaKnown RBP6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 PARP12Q9H0J9 701 aaKnown RBP6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 SEBOXQ9HB31 216 aaPredicted RBP6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 Q9N2K0 584 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 CACFD1Q9UGQ2 172 aa6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 AMMECR1Q9Y4X0 333 aaPredicted RBP6.94□□□□□ -1.3
SYNGAP1-205ENST00000470232 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 DUXBA0A1W2PPF3 345 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 FAM24AA6NFZ4 105 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 OVOL1O14753 267 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 HSD17B6O14756 317 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 MGST3O14880 152 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 MMP23AO75900 390 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 CDS2O95674 445 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 CTXN2P0C2S0 81 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 PRKACAP17612 351 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 GNRHRP30968 328 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 SNCAP37840 140 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 RPL35P42766 123 aaKnown RBP6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 GPR12P47775 334 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 PPT1P50897 306 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 ERVK11-1P61568 191 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 IL24Q13007 206 aa6.93□□□□□ -1.3
SYNGAP1-205ENST00000470232 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms