RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 OR1C1Q15619 314 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 RRN3P1Q2M238 152 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF718Q3SXZ3 478 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 OR4C11Q6IEV9 310 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 LHFPL1Q86WI0 220 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 GAPTQ8N292 157 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 CYB561D1Q8N8Q1 229 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF114Q8NC26 417 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 NUP35Q8NFH5 326 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 OR51H1Q8NH63 302 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 STAG3L4Q8TBR4 150 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 DPH3Q96FX2 82 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 CARD19Q96LW7 228 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ADOQ96SZ5 270 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 GPR21Q99679 349 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 ULBP3Q9BZM4 244 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 AAMDCQ9H7C9 122 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 PLEKHF2Q9H8W4 249 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 SDF2L1Q9HCN8 221 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 PHPT1Q9NRX4 125 aaPredicted RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 WRAP73Q9P2S5 460 aaPredicted RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 MTFP1Q9UDX5 166 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 LSM7Q9UK45 103 aaKnown RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 PYGO1Q9Y3Y4 419 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 KLF12Q9Y4X4 402 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 RNF114Q9Y508 228 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 CHCHD2Q9Y6H1 151 aaPredicted RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 TRIP11Q15643 1979 aa4.19□□□□□ -1.74
COL3A1-205ENST00000470167 BAZ2AQ9UIF9 1905 aaKnown RBP4.19□□□□□ -1.74
COL3A1-205ENST00000470167 MYO10Q9HD67 2058 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 TJP1Q07157 1748 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 NWD2Q9ULI1 1742 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 COL14A1Q05707 1796 aaKnown RBP4.18□□□□□ -1.74
COL3A1-205ENST00000470167 TRAV9-1A0A075B6T8 112 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 A0A0G2JK05 382 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 MYBPHLA2RUH7 354 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 C5orf63A6NC05 138 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 ZAR1LA6NP61 321 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 FCN1O00602 326 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 SPINT2O43291 252 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 HOXA3O43365 443 aaPredicted RBP4.18□□□□□ -1.74
COL3A1-205ENST00000470167 NDUFB4O95168 129 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 LSM8O95777 96 aaKnown RBP4.18□□□□□ -1.74
COL3A1-205ENST00000470167 MT-ND6P03923 174 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 PTHLHP12272 177 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 PFN2P35080 140 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 CAV3P56539 151 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 CLDN2P57739 230 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 POU3F1Q03052 451 aaPredicted RBP4.18□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF90Q03938 601 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 FUT5Q11128 374 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 EIF3IQ13347 325 aaKnown RBP4.18□□□□□ -1.74
COL3A1-205ENST00000470167 EBI3Q14213 229 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 WFDC2Q14508 124 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 SSX8Q7RTT4 187 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 PRSS45Q7RTY3 260 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 TPRX1Q8N7U7 411 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF441Q8N8Z8 693 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 SMRP1Q8NCR6 262 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 OR2T10Q8NGZ9 312 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 OR4K13Q8NH42 304 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 IGFBPL1Q8WX77 278 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 PRELID3AQ96N28 172 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 RNF126Q9BV68 326 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 KRTAP17-1Q9BYP8 105 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 NRN1Q9NPD7 142 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 NSG2Q9Y328 171 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 INSL5Q9Y5Q6 135 aa4.18□□□□□ -1.74
COL3A1-205ENST00000470167 HELZP42694 1942 aaKnown RBP4.18□□□□□ -1.74
COL3A1-205ENST00000470167 SIPA1L3O60292 1781 aaPredicted RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 UBR2Q8IWV8 1755 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ADAMTS7Q9UKP4 1686 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 PIEZO1Q92508 2521 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 TRBV20-1A0A075B6N2 111 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 A0A1B0GTH9 108 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 RIIAD1A6NNX1 92 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 TMEM150CB9EJG8 249 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 K7N7A8 449 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 HCRTO43612 131 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ANGPTL7O43827 346 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 SERF1AO75920 110 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ZFAND5O76080 213 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 C3orf79P0CE67 100 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 BCL2P10415 239 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 CR2P20023 1033 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 GATA2P23769 480 aaPredicted RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 KRTDAPP60985 99 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ICAM4Q14773 271 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ATXN7L3Q14CW9 347 aaPredicted RBP4.17□□□□□ -1.74
COL3A1-205ENST00000470167 IL17AQ16552 155 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 C9orf153Q5TBE3 101 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 HIST2H2BCQ6DN03 193 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
COL3A1-205ENST00000470167 ZNF550Q7Z398 422 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms