RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 RBMY1CP0DJD4 496 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGKV1-13P0DP09 117 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 HIST1H1DP16402 221 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 IRF3Q14653 427 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 RBMY1FQ15415 496 aaKnown RBP13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 TIMM50Q3ZCQ8 353 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 LIPKQ5VXJ0 399 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 DHRSXQ8N5I4 330 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 C21orf62Q9NYP8 219 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 V9GY05 133 aa13.78□□□□□ -0.2
NCKIPSD-209ENST00000470006 IGHV7-4-1A0A0J9YVY3 117 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 C15orf61A6NNL5 157 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 CHEK1O14757 476 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 ARL6IP5O75915 188 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 CTXN2P0C2S0 81 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 OR13C7P0DN81 318 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 BRWD1-AS2P59051 145 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 SPHARQ15513 63 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 LEMD1Q68G75 181 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 Q6ZS49 121 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 OR10W1Q8NGF6 305 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 UFD1Q92890 307 aa13.77□□□□□ -0.21
NCKIPSD-209ENST00000470006 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 DEFB131BA0A096LNP1 70 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 TNFSF12O43508 249 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 CALRP27797 417 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 ZNF66Q6ZN08 573 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 STHQ8IWL8 128 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 C8orf59Q8N0T1 100 aaPredicted RBP13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 GDPD1Q8N9F7 314 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 GIMAP1Q8WWP7 306 aa13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 QTRT1Q9BXR0 403 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-209ENST00000470006 IGLV2-18A0A075B6J9 118 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 TRAV3A0A0B4J244 114 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 IFNA10P01566 189 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 MIFP14174 115 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 DEFB131AP59861 70 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 LGALS9BQ3B8N2 356 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 TMEM91Q6ZNR0 172 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 SPAG16Q8N0X2 631 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 SCARB1Q8WTV0 552 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 SRSF8Q9BRL6 282 aaKnown RBP13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 NDUFAF3Q9BU61 184 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 HINT2Q9BX68 163 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 ELF5Q9UKW6 265 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-209ENST00000470006 METTL21EPA6NDL7 271 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 UPK2O00526 184 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 EIF4EP06730 217 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 HSMCR30P0CW71 290 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 DTYMKP23919 212 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 RPL11P62913 178 aaKnown RBP13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 RELQ04864 619 aaPredicted RBP13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 SOHLH1Q5JUK2 328 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 LAIR2Q6ISS4 152 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 ZNF767PQ75MW2 155 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 TCF24Q7RTU0 167 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 UBE2DNLQ8IWF7 75 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 DMBX1Q8NFW5 382 aa13.74□□□□□ -0.21
NCKIPSD-209ENST00000470006 TRAV14DV4A0A0A6YYC5 116 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 PTGES3LE9PB15 166 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 SERPINE2P07093 398 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 RPS25P62851 125 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 EIF4EBP1Q13541 118 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 MAPKAPK5-AS1Q8N8E1 139 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 ATG5Q9H1Y0 275 aa13.73□□□□□ -0.21
NCKIPSD-209ENST00000470006 ELOA3CA0A087WX78 387 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 NUPL2O15504 423 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 IFNA21P01568 189 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 IFNA17P01571 189 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 AMBPP02760 352 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 GNAO1P09471 354 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 NQO2P16083 231 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 SECTM1Q8WVN6 248 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 ATP6V0BQ99437 205 aa13.72□□□□□ -0.21
NCKIPSD-209ENST00000470006 SULT1C2O00338 296 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 TAS2R31P59538 309 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 WT1-ASQ06250 92 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 ARL6IP1Q15041 203 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 TRAM1Q15629 374 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 CDNFQ49AH0 187 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 CNIH2Q6PI25 160 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 HSD17B13Q7Z5P4 300 aaPredicted RBP13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 TMEM140Q9NV12 185 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 FKBP14Q9NWM8 211 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 LSM2Q9Y333 95 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 HSPG2P98160 4391 aa13.71□□□□□ -0.21
NCKIPSD-209ENST00000470006 AGRNO00468 2067 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 F8W735 103 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 ST8SIA3O43173 380 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 DFFBO76075 338 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 HPRT1P00492 218 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 CTSGP08311 255 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 RAB6AP20340 208 aa13.7□□□□□ -0.22
NCKIPSD-209ENST00000470006 FAM90A2PQ658T7 463 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms