RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 IGKV1-33P01594 117 aa13.29□□□□□ -0.28
BRAT1-204ENST00000469750 NPIPB7O75200 414 aa13.29□□□□□ -0.28
BRAT1-204ENST00000469750 WDR25Q64LD2 544 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-204ENST00000469750 NPCDR1Q9BY65 106 aa13.29□□□□□ -0.28
BRAT1-204ENST00000469750 EP300Q09472 2414 aaPredicted RBP13.29□□□□□ -0.28
BRAT1-204ENST00000469750 OTOFQ9HC10 1997 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 UQCRFS1P47985 274 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 RAXQ9Y2V3 346 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 TRGC1P0CF51 173 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 CD59P13987 128 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 RPRMQ9NS64 109 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 LYPD3O95274 346 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 CFHR1Q03591 330 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 CLDND2Q8NHS1 167 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 LCTP09848 1927 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 TMEM250H0YL14 139 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 NUDT3O95989 172 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 PF4P02776 101 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 DLX6P56179 175 aa13.28□□□□□ -0.28
BRAT1-204ENST00000469750 RTBDNQ9BSG5 229 aaPredicted RBP13.28□□□□□ -0.28
BRAT1-204ENST00000469750 MRPL20Q9BYC9 149 aaKnown RBP13.28□□□□□ -0.28
BRAT1-204ENST00000469750 TGIF2-C20orf24A0A0A6YYL0 155 aa13.27□□□□□ -0.28
BRAT1-204ENST00000469750 HIST1H1AQ02539 215 aaPredicted RBP13.27□□□□□ -0.28
BRAT1-204ENST00000469750 FBXL7Q9UJT9 491 aa13.27□□□□□ -0.28
BRAT1-204ENST00000469750 IGHV3OR16-13A0A075B7E8 117 aa13.27□□□□□ -0.28
BRAT1-204ENST00000469750 IGHV3-74A0A0B4J1X5 117 aa13.27□□□□□ -0.28
BRAT1-204ENST00000469750 SAMD13Q5VXD3 122 aa13.27□□□□□ -0.28
BRAT1-204ENST00000469750 TCF24Q7RTU0 167 aa13.27□□□□□ -0.28
BRAT1-204ENST00000469750 RCC1LQ96I51 464 aaKnown RBP13.27□□□□□ -0.28
BRAT1-204ENST00000469750 SLC25A34Q6PIV7 304 aa13.27□□□□□ -0.29
BRAT1-204ENST00000469750 NEU1Q99519 415 aa13.27□□□□□ -0.29
BRAT1-204ENST00000469750 HERPUD1Q15011 391 aa13.27□□□□□ -0.29
BRAT1-204ENST00000469750 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.29
BRAT1-204ENST00000469750 RTTNQ86VV8 2226 aa13.27□□□□□ -0.29
BRAT1-204ENST00000469750 SPTBN2O15020 2390 aa13.27□□□□□ -0.29
BRAT1-204ENST00000469750 A0A0G2JLM5 398 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 PLPPR1Q8TBJ4 325 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 GPR82Q96P67 336 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 ZNF646O15015 1829 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-204ENST00000469750 SDK2Q58EX2 2172 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 FAM181BA6NEQ2 426 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 FOXI3A8MTJ6 420 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-204ENST00000469750 CENPWQ5EE01 88 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 PPP1R27Q86WC6 154 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
BRAT1-204ENST00000469750 ZP1P60852 638 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 ICAM4Q14773 271 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 SFRP2Q96HF1 295 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 FAM159AQ6UWV7 190 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 ARPC1AQ92747 370 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-204ENST00000469750 C7orf69Q9H7B7 122 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 C21orf62Q9NYP8 219 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 PINLYPA6NC86 204 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 NBEAP1P0C6P0 100 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 CCL1P22362 96 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 GCSHP23434 173 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 SRIP30626 198 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 ZNF506Q5JVG8 444 aa13.26□□□□□ -0.29
BRAT1-204ENST00000469750 MSGN1A6NI15 193 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 IGHV3-23P01764 117 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 FOXA2Q9Y261 457 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-204ENST00000469750 TRBV6-7A0A0A0MS04 114 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 TMEM238LA0A1B0GVL6 79 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 A6NJY4 79 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 IGFBP2P18065 325 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 CDKN1AP38936 164 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 SPRR3Q9UBC9 169 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 FBLN5Q9UBX5 448 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 CTAG1AP78358 180 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 ZIC4Q8N9L1 334 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 NUP37Q8NFH4 326 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 MBNL2Q5VZF2 373 aaKnown RBP13.25□□□□□ -0.29
BRAT1-204ENST00000469750 TMEM183AQ8IXX5 376 aa13.25□□□□□ -0.29
BRAT1-204ENST00000469750 TRBV9A0A0B4J1U6 114 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 GPX4P36969 197 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-204ENST00000469750 NIT1Q86X76 327 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 MESP1Q9BRJ9 268 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 S4R3C0 116 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 SPACA3Q8IXA5 215 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 LYZL4Q96KX0 146 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 A0A0G2JMZ2 1700 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 LRRC37A2A6NM11 1700 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-204ENST00000469750 CCL3L1P16619 93 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 EGR1P18146 543 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
BRAT1-204ENST00000469750 VENTXO95231 258 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 IGKV3-20P01619 116 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 ZNF56Q15929 161 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 FAM74A4Q5TZK3 123 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 WDR82Q6UXN9 313 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 RAB37Q96AX2 223 aa13.24□□□□□ -0.29
BRAT1-204ENST00000469750 CHD5Q8TDI0 1954 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 IGKV1-9A0A0C4DH69 117 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 E9PLN8 166 aa13.23□□□□□ -0.29
BRAT1-204ENST00000469750 YPEL1O60688 119 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms