RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TRAV3A0A0B4J244 114 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 PNMA8CA0A1B0GUJ8 204 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 OR2T8A6NH00 312 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 KNCNA6PVL3 124 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 FOXI3A8MTJ6 420 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-209ENST00000469511 PRYO14603 147 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 CHEK1O14757 476 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 TGOLN2O43493 480 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 IFNA21P01568 189 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 IFNA17P01571 189 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 SMR3BP02814 79 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-209ENST00000469511 ZNF735P0CB33 412 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 GSTT2P0CG29 244 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 GSTT2BP0CG30 244 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 RPL27AP46776 148 aaKnown RBP3.73□□□□□ -1.81
PTPN4-209ENST00000469511 MNAT1P51948 309 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 QRFPP83859 136 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 PLA2G7Q13093 441 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 FLOT2Q14254 428 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 Q499Y3 187 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 HSP90B2PQ58FF3 399 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 SOHLH1Q5JUK2 328 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 Q5VSD8 79 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 LAMTOR1Q6IAA8 161 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 RPL22L1Q6P5R6 122 aaKnown RBP3.73□□□□□ -1.81
PTPN4-209ENST00000469511 MMD2Q8IY49 270 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 LYPD1Q8N2G4 141 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.73□□□□□ -1.81
PTPN4-209ENST00000469511 GGHQ92820 318 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 RHPN1-AS1Q9BWJ2 59 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 OR51E2Q9H255 320 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 PLEKHA2Q9HB19 425 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 POMPQ9Y244 141 aa3.73□□□□□ -1.81
PTPN4-209ENST00000469511 IGKV1D-8A0A087WSZ0 117 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 IGHV3-66A0A0C4DH42 116 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 DPPA5A6NC42 116 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 TMEM14DPA8MWL7 114 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 BET1O15155 118 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 FCGR3BO75015 233 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 IGLV2-14P01704 120 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 MIFP14174 115 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 HAMPP81172 84 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 RTL8BQ17RB0 113 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 SUMO4Q6EEV6 95 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 TRPT1Q86TN4 253 aaKnown RBP3.72□□□□□ -1.81
PTPN4-209ENST00000469511 PUSL1Q8N0Z8 303 aaKnown RBP3.72□□□□□ -1.81
PTPN4-209ENST00000469511 C6orf223Q8N319 242 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 OR10W1Q8NGF6 305 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 APH1BQ8WW43 257 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 SMIM19Q96E16 107 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 ARHGAP5-AS1Q96IT6 56 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 DERL3Q96Q80 235 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 DCUN1D5Q9BTE7 237 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 TM2D1Q9BX74 207 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 KRTAP1-5Q9BYS1 174 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 C6orf62Q9GZU0 229 aaPredicted RBP3.72□□□□□ -1.81
PTPN4-209ENST00000469511 LPAR5Q9H1C0 372 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 DAZ1Q9NQZ3 744 aaKnown RBP3.72□□□□□ -1.81
PTPN4-209ENST00000469511 PLEKHJ1Q9NW61 149 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 IMPAD1Q9NX62 359 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 KCNK7Q9Y2U2 307 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 ARL2BPQ9Y2Y0 163 aa3.72□□□□□ -1.81
PTPN4-209ENST00000469511 IGHV7-4-1A0A0J9YVY3 117 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 NBDYA0A0U1RRE5 68 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 IGLC7A0M8Q6 106 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 TRDCB7Z8K6 153 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 MRPS14O60783 128 aaKnown RBP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 KBTBD11O94819 623 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 HTN3P15516 51 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 SRMP19623 302 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 CALB2P22676 271 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 CRHBPP24387 322 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 PTBP1P26599 531 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 MAS1LP35410 378 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 PSMD7P51665 324 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 OR2B8PP59922 312 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 DLK1P80370 383 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 CCDC58Q4VC31 144 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 MEDAGQ5VYS4 303 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 MOB1BQ7L9L4 216 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 ZNF367Q7RTV3 350 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 LRRTM1Q86UE6 522 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 SLC25A42Q86VD7 318 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 ZNF485Q8NCK3 441 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 TMEM116Q8NCL8 245 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 RHOXF1Q8NHV9 184 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 TMEM167AQ8TBQ9 72 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 TRUB1Q8WWH5 349 aaKnown RBP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 CXorf58Q96LI9 332 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 OR2A7Q96R45 310 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 GFI1Q99684 422 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 TMEM59Q9BXS4 323 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 PECRQ9BY49 303 aa3.71□□□□□ -1.82
PTPN4-209ENST00000469511 YTHDF1Q9BYJ9 559 aaKnown RBP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 FGF20Q9NP95 211 aaPredicted RBP3.71□□□□□ -1.82
PTPN4-209ENST00000469511 BABAM2Q9NXR7 383 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms