RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GYPCP04921 128 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 ERVS71-1P61550 626 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 LSM6P62312 80 aaKnown RBP2.37□□□□□ -2.03
LSM5-209ENST00000468872 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
LSM5-209ENST00000468872 PAFAH1B3Q15102 231 aaKnown RBP2.37□□□□□ -2.03
LSM5-209ENST00000468872 C10orf91Q5T1B1 145 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 LRP11Q86VZ4 500 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 C10orf67Q8IYJ2 551 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 OR4P4Q8NGL7 312 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 OR9I1Q8NGQ6 314 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 STOML3Q8TAV4 291 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 SPPL2BQ8TCT7 592 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 PPP1R14BQ96C90 147 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 SLC22A4Q9H015 551 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 MS4A6AQ9H2W1 248 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 KCNIP2Q9NS61 270 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 SLC23A2Q9UGH3 650 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 NUP205Q92621 2012 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 TANC1Q9C0D5 1861 aa2.37□□□□□ -2.03
LSM5-209ENST00000468872 ANKRD36CQ5JPF3 1778 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 SCN10AQ9Y5Y9 1956 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 IGHV3OR15-7A0A075B7D8 119 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.36□□□□□ -2.03
LSM5-209ENST00000468872 IGKV1-12A0A0C4DH73 117 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 A0A1W2PQL4 384 aaPredicted RBP2.36□□□□□ -2.03
LSM5-209ENST00000468872 LRRN3E7EW58 273 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 ASS1P00966 412 aaKnown RBP2.36□□□□□ -2.03
LSM5-209ENST00000468872 IGKV1D-12P01611 117 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 OPN1SWP03999 348 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 IFNA6P05013 189 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 NQO1P15559 274 aaKnown RBP2.36□□□□□ -2.03
LSM5-209ENST00000468872 RCVRNP35243 200 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 CD200R1LQ6Q8B3 271 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 VN1R4Q7Z5H5 301 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 MTERF4Q7Z6M4 381 aaKnown RBP2.36□□□□□ -2.03
LSM5-209ENST00000468872 NIT1Q86X76 327 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 OR52E4Q8NGH9 312 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 ZNRF2Q8NHG8 242 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 PPCDCQ96CD2 204 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 PRAP1Q96NZ9 151 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 TMEM208Q9BTX3 173 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 CHST5Q9GZS9 411 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 EMC3Q9P0I2 261 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 MCTS1Q9ULC4 181 aaKnown RBP2.36□□□□□ -2.03
LSM5-209ENST00000468872 GUCA1BQ9UMX6 200 aa2.36□□□□□ -2.03
LSM5-209ENST00000468872 A0A1W2PNM2 257 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 TYMSP04818 313 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 RPS17P08708 135 aaKnown RBP2.35□□□□□ -2.03
LSM5-209ENST00000468872 F8A1P23610 371 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 IFNGR2P38484 337 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 PPP1R2P41236 205 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 AP3S2P59780 193 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 APOFQ13790 326 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 SPIN4Q56A73 249 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 PPP1R2P3Q6NXS1 205 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 GPR32P1Q8NGA4 272 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 ANP32BQ92688 251 aaKnown RBP2.35□□□□□ -2.03
LSM5-209ENST00000468872 RAD51AP1Q96B01 352 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 OR51V1Q9H2C8 321 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 ZNF286AQ9HBT8 521 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 SPANXB1Q9NS25 103 aaPredicted RBP2.35□□□□□ -2.03
LSM5-209ENST00000468872 FGFR1OP2Q9NVK5 253 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 OR51B4Q9Y5P0 310 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 COL7A1Q02388 2944 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 CLUHO75153 1309 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 EVC2Q86UK5 1308 aa2.35□□□□□ -2.03
LSM5-209ENST00000468872 MICAL3Q7RTP6 2002 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 METTL15A6NJ78 407 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 EEF1E1O43324 174 aaKnown RBP2.34□□□□□ -2.03
LSM5-209ENST00000468872 PSCAO43653 123 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 RPP14O95059 124 aaKnown RBP2.34□□□□□ -2.03
LSM5-209ENST00000468872 OR5F1O95221 314 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 TCRBP04435 133 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 ZNF22P17026 224 aaPredicted RBP2.34□□□□□ -2.03
LSM5-209ENST00000468872 STX5Q13190 355 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 HTR4Q13639 388 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 DNAL1Q4LDG9 190 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 ACSM3Q53FZ2 586 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 PYCR3Q53H96 274 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 CENPWQ5EE01 88 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 HENMT1Q5T8I9 393 aaKnown RBP2.34□□□□□ -2.03
LSM5-209ENST00000468872 LRRN1Q6UXK5 716 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 SCXQ7RTU7 201 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 SLC13A5Q86YT5 568 aaPredicted RBP2.34□□□□□ -2.03
LSM5-209ENST00000468872 OR1M1Q8NGA1 313 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 SLC37A2Q8TED4 501 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 ASB13Q8WXK3 278 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 HIST1H2BAQ96A08 127 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 C9orf16Q9BUW7 83 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 HIGD2AQ9BW72 106 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 METTL9Q9H1A3 318 aa2.34□□□□□ -2.03
LSM5-209ENST00000468872 ANK3Q12955 4377 aaKnown RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 SIPA1L1O43166 1804 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 DAPL1A0PJW8 107 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 TMEM114B3SHH9 223 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 E7EQL1 145 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 PFDN6O15212 129 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 NSA2O95478 260 aaKnown RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 CDS2O95674 445 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 HLA-DRAP01903 254 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 223.8 ms