RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 TP53RKQ96S44 253 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 ATP6V0BQ99437 205 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 HSPB9Q9BQS6 159 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 QTRT1Q9BXR0 403 aaKnown RBP2.76□□□□□ -1.97
TRIM59-202ENST00000468542 COMMD5Q9GZQ3 224 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 NAA60Q9H7X0 242 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 ZNF430Q9H8G1 570 aaPredicted RBP2.76□□□□□ -1.97
TRIM59-202ENST00000468542 TMEM140Q9NV12 185 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 SHPKQ9UHJ6 478 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 FOXA2Q9Y261 457 aaPredicted RBP2.76□□□□□ -1.97
TRIM59-202ENST00000468542 TSSC4Q9Y5U2 329 aaPredicted RBP2.76□□□□□ -1.97
TRIM59-202ENST00000468542 COL7A1Q02388 2944 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 NOTCH3Q9UM47 2321 aa2.76□□□□□ -1.97
TRIM59-202ENST00000468542 TET2Q6N021 2002 aaPredicted RBP2.76□□□□□ -1.97
TRIM59-202ENST00000468542 TRBV9A0A0B4J1U6 114 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 A0A0G2JLM5 398 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 A0A1B0GU03 582 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 A0A1W2PN81 502 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 IGLC7A0M8Q6 106 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 MSGN1A6NI15 193 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FAM223BA6NKX1 122 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FAM90A26D6RGX4 464 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 J3QRK9 145 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FCN1O00602 326 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 CYB5BO43169 146 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 SNAPC5O75971 98 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 CNIH1O95406 144 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 SFT2D2O95562 160 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 DUS4LO95620 317 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 KRASP01116 189 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 IGKV1-39P01597 117 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 IGKV1D-39P04432 117 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TCRBP04435 133 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 OR5AC1P0C628 307 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 OR9G9P0C7N8 305 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 PI3P19957 117 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 HOXA5P20719 270 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 CHRNA7P36544 502 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 LPAR6P43657 344 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 RPL27AP46776 148 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 RAB9AP51151 201 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 AKR1C2P52895 323 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 ATP5IP56385 69 aaPredicted RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 RAB25P57735 213 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 LINC00310P59036 64 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 DEFA1P59665 94 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 DEFA3P59666 94 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 OR2B8PP59922 312 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 RPL23AP62750 156 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 SUPT4H1P63272 117 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 PJVKQ0ZLH3 352 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FHL3Q13643 280 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TMEM187Q14656 261 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TNXAQ16473 311 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TRIM16LQ309B1 348 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 RNASE12Q5GAN4 147 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 NMSQ5H8A3 153 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 OR2B11Q5JQS5 317 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 C9orf152Q5JTZ5 239 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 MZT2BQ6NZ67 158 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TMEM65Q6PI78 240 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 H2BFWTQ7Z2G1 175 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FAM223AQ8IWN6 122 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 LGI3Q8N145 548 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 ZNF114Q8NC26 417 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 NECAP1Q8NC96 275 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 ADAD2Q8NCV1 583 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 DUSP18Q8NEJ0 188 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 DMBX1Q8NFW5 382 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 OR1L8Q8NGR8 309 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 GRPEL2Q8TAA5 225 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FAM110DQ8TAY7 271 aaPredicted RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 C4orf3Q8WVX3 66 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TMEM230Q96A57 120 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 RRNAD1Q96FB5 475 aaKnown RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 NOL4LQ96MY1 436 aaPredicted RBP2.75□□□□□ -1.97
TRIM59-202ENST00000468542 PARP11Q9NR21 331 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 NDUFA4L2Q9NRX3 87 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 THYN1Q9P016 225 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TBC1D24Q9ULP9 559 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 VSIG4Q9Y279 399 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 FBXO7Q9Y3I1 522 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 TMED3Q9Y3Q3 217 aa2.75□□□□□ -1.97
TRIM59-202ENST00000468542 A0A0B4J293 547 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 FAM240BA0A1B0GVZ2 78 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 TCRBV4S1A1TA0A5B7 111 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 C9orf170A2RU37 121 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 LINC01548A6NM66 108 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 TEX22C9J3V5 150 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 G3V318 75 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 H3BS24 57 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 I3L521 148 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 CORTO00230 105 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 SOX15O60248 233 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 PRAF2O60831 178 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 PTTG1O95997 202 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 IGKV1-5P01602 117 aa2.74□□□□□ -1.97
TRIM59-202ENST00000468542 HLA-AP01891 365 aaKnown RBP2.74□□□□□ -1.97
TRIM59-202ENST00000468542 OR4E1P0C645 316 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 273.9 ms