RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FAM222AQ5U5X8 452 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 TTC23Q5W5X9 447 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 GDPD1Q8N9F7 314 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 TCTEX1D2Q8WW35 142 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 ST8SIA2Q92186 375 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 DGCR14Q96DF8 476 aaKnown RBP7.22□□□□□ -1.25
HDAC3-203ENST00000467533 OR10C1Q96KK4 312 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 PGLYRP3Q96LB9 341 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 URM1Q9BTM9 101 aaKnown RBP7.22□□□□□ -1.25
HDAC3-203ENST00000467533 C1QTNF4Q9BXJ3 329 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 LPAR5Q9H1C0 372 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 OAZ3Q9UMX2 235 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 ORC6Q9Y5N6 252 aa7.22□□□□□ -1.25
HDAC3-203ENST00000467533 IGHV3-66A0A0C4DH42 116 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 SAC3D1A6NKF1 404 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 TMEM14DPA8MWL7 114 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 FUSP35637 526 aaKnown RBP eCLIP7.21□□□□□ -1.26
HDAC3-203ENST00000467533 RPL30P62888 115 aaKnown RBP7.21□□□□□ -1.26
HDAC3-203ENST00000467533 ZIK1Q3SY52 487 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-203ENST00000467533 DUSP18Q8NEJ0 188 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 STXBP6Q8NFX7 210 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 SCARB1Q8WTV0 552 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 ARHGAP5-AS1Q96IT6 56 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 Q96MT0 163 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 ATP6V0BQ99437 205 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 GINS3Q9BRX5 216 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 PECRQ9BY49 303 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 HRASLSQ9HDD0 168 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 BABAM2Q9NXR7 383 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 XCL2Q9UBD3 114 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 DKK2Q9UBU2 259 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 HSF4Q9ULV5 492 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 POMPQ9Y244 141 aa7.21□□□□□ -1.26
HDAC3-203ENST00000467533 DIRAS3O95661 229 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 HRASP01112 189 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 GABRB1P18505 474 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 TAS2R43P59537 309 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 TIMM50Q3ZCQ8 353 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 TTC32Q5I0X7 151 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 OR10W1Q8NGF6 305 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 MAFIPQ8WZ33 124 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 SRSF8Q9BRL6 282 aaKnown RBP7.2□□□□□ -1.26
HDAC3-203ENST00000467533 COMMD5Q9GZQ3 224 aa7.2□□□□□ -1.26
HDAC3-203ENST00000467533 RBMX2Q9Y388 322 aaKnown RBP7.2□□□□□ -1.26
HDAC3-203ENST00000467533 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 IGHV3OR16-12A0A075B7B8 117 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 RPS10-NUDT3A0A1W2PQS6 291 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 K7EQG2 157 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 BPNT1O95861 308 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 NUDT3O95989 172 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 APOHP02749 345 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 CTSGP08311 255 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 FCGR3AP08637 254 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 OR13C7P0DN81 318 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 MAPK3P27361 379 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 FGF9P31371 208 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 CCL18P55774 89 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 NUTF2P61970 127 aaKnown RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 QRFPP83859 136 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 ICAM4Q14773 271 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 C1orf100Q5SVJ3 147 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 GSG1LQ6UXU4 331 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 H1FOOQ8IZA3 346 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 GRAMD2BQ96HH9 432 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 NEU1Q99519 415 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 QTRT1Q9BXR0 403 aaKnown RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 VSIRQ9H7M9 311 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 FGF20Q9NP95 211 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 MRPS18AQ9NVS2 196 aaKnown RBP7.19□□□□□ -1.26
HDAC3-203ENST00000467533 BET1LQ9NYM9 111 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 SPATA2Q9UM82 520 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 RFNGQ9Y644 331 aa7.19□□□□□ -1.26
HDAC3-203ENST00000467533 FOXI3A8MTJ6 420 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-203ENST00000467533 K7EIM0 57 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 CDK1P06493 297 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 SERPINE2P07093 398 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 FCGR1AP12314 374 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 MYL12AP19105 171 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 TMEM50BP56557 158 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 DAD1P61803 113 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 OXA1LQ15070 435 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 SSX1Q16384 188 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 RBM48Q5RL73 367 aaKnown RBP7.18□□□□□ -1.26
HDAC3-203ENST00000467533 ZNF773Q6PK81 442 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 FAM89BQ8N5H3 189 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 HSD17B10Q99714 261 aaKnown RBP7.18□□□□□ -1.26
HDAC3-203ENST00000467533 KRTAP1-5Q9BYS1 174 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 TMEM231Q9H6L2 316 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
HDAC3-203ENST00000467533 F11RQ9Y624 299 aaKnown RBP7.18□□□□□ -1.26
HDAC3-203ENST00000467533 SMIM9A6NGZ8 99 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 ZNF705FA8MVS1 300 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-203ENST00000467533 EREGO14944 169 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 IFNA5P01569 189 aa7.17□□□□□ -1.26
HDAC3-203ENST00000467533 ZNF705DP0CH99 300 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-203ENST00000467533 ZNF705BP0CI00 300 aaPredicted RBP7.17□□□□□ -1.26
HDAC3-203ENST00000467533 DCKP27707 260 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms