RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 OR2C3Q8N628 320 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 LFNGQ8NES3 379 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 OR2T10Q8NGZ9 312 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 OR51H1Q8NH63 302 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
DDX56-208ENST00000467318 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 RNF5Q99942 180 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 SMDT1Q9H4I9 107 aa11.83□□□□□ -0.52
DDX56-208ENST00000467318 H0Y980 276 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 RBFOX2O43251 390 aaKnown RBP eCLIP11.82□□□□□ -0.527e-8■□□□□ 9
DDX56-208ENST00000467318 TSPAN9O75954 239 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 MOSP00540 346 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 IGKV1D-33P01593 117 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 IGKV1-33P01594 117 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 SNRNP70P08621 437 aaKnown RBP11.82□□□□□ -0.52
DDX56-208ENST00000467318 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 CAMLGP49069 296 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 HES1Q14469 280 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 GUCA2BQ16661 112 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 DMBX1Q8NFW5 382 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 FLYWCH2Q96CP2 140 aaKnown RBP11.82□□□□□ -0.52
DDX56-208ENST00000467318 PBDC1Q9BVG4 233 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 TCF19Q9Y242 345 aa11.82□□□□□ -0.52
DDX56-208ENST00000467318 UMAD1C9J7I0 102 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 HOXA3O43365 443 aaPredicted RBP11.81□□□□□ -0.52
DDX56-208ENST00000467318 FCGR3BO75015 233 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 IGHV4-59P01825 116 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 SRSF3P84103 164 aaKnown RBP11.81□□□□□ -0.52
DDX56-208ENST00000467318 BAXQ07812 192 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 OR4S2Q8NH73 311 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 C11orf1Q9H5F2 150 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 CACFD1Q9UGQ2 172 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 A0A1B0GW64 132 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 CLDN34H7C241 214 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 PITX3O75364 302 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 SFTA3P0C7M3 94 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 CD24P25063 80 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 SNCAP37840 140 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 HILS1P60008 231 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
DDX56-208ENST00000467318 EAF1Q96JC9 268 aaPredicted RBP11.81□□□□□ -0.52
DDX56-208ENST00000467318 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
DDX56-208ENST00000467318 PRH1P02810 166 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 TMEM11P17152 192 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 LGALS7P47929 136 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 ID3Q02535 119 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 TMEM177Q53S58 311 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 C16orf82Q7Z2V1 217 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 OSR1Q8TAX0 266 aaPredicted RBP11.8□□□□□ -0.52
DDX56-208ENST00000467318 TMEM231Q9H6L2 316 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 WFDC1Q9HC57 220 aa11.8□□□□□ -0.52
DDX56-208ENST00000467318 LYRM2Q9NU23 88 aaPredicted RBP11.8□□□□□ -0.52
DDX56-208ENST00000467318 A0A1B0GU03 582 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 A6NDX4 124 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 WRBO00258 174 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 TCF21O43680 179 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 HPRT1P00492 218 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 SERPINE2P07093 398 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 RPS16P62249 146 aaKnown RBP11.79□□□□□ -0.52
DDX56-208ENST00000467318 OR2B11Q5JQS5 317 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 Q8N6K4 173 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
DDX56-208ENST00000467318 RBM14Q96PK6 669 aaKnown RBP11.79□□□□□ -0.52
DDX56-208ENST00000467318 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 C1RLQ9NZP8 487 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 PRELID1Q9Y255 219 aa11.79□□□□□ -0.52
DDX56-208ENST00000467318 NIPBLQ6KC79 2804 aaeCLIP11.79□□□□□ -0.52
DDX56-208ENST00000467318 RAMP3O60896 148 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 NHLH2Q02577 135 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 HNF4GQ14541 408 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 LY6EQ16553 131 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 GUK1Q16774 197 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 SMCO4Q9NRQ5 59 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 M0QZK8 103 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 HRASP01112 189 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
DDX56-208ENST00000467318 ZNF616Q08AN1 781 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 ZNF585BQ52M93 769 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 DPPA3Q6W0C5 159 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
DDX56-208ENST00000467318 BSCL2Q96G97 398 aaPredicted RBP11.78□□□□□ -0.52
DDX56-208ENST00000467318 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 SLC25A33Q9BSK2 321 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 ESM1Q9NQ30 184 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 MLXQ9UH92 298 aa11.78□□□□□ -0.52
DDX56-208ENST00000467318 FAM24AA6NFZ4 105 aa11.77□□□□□ -0.53
DDX56-208ENST00000467318 DFFBO76075 338 aa11.77□□□□□ -0.53
DDX56-208ENST00000467318 NPBWR1P48145 328 aa11.77□□□□□ -0.53
DDX56-208ENST00000467318 RAB2AP61019 212 aa11.77□□□□□ -0.53
DDX56-208ENST00000467318 POLR2GP62487 172 aaKnown RBP eCLIP11.77□□□□□ -0.53
DDX56-208ENST00000467318 MMDQ15546 238 aa11.77□□□□□ -0.53
DDX56-208ENST00000467318 TMEM219Q86XT9 240 aa11.77□□□□□ -0.53
DDX56-208ENST00000467318 TMEM252Q8N6L7 170 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms