RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 IL3RAP26951 378 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 PRRX1P54821 245 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 ARF6P62330 175 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 CYB561D1Q8N8Q1 229 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 C8orf46Q8TAG6 207 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 IGFBPL1Q8WX77 278 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 C1orf159Q96HA4 380 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 MGST2Q99735 147 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 CHODLQ9H9P2 273 aa10.96□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PPH5 198 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 M0R036 132 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 SLC25A17O43808 307 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 SNRNP70P08621 437 aaKnown RBP10.95□□□□□ -0.66
UBE4B-206ENST00000466379 CNTFRP26992 372 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
UBE4B-206ENST00000466379 DLK1P80370 383 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 AWAT1Q58HT5 328 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 SOHLH1Q5JUK2 328 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 MOB3BQ86TA1 216 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 COMMD5Q9GZQ3 224 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 CFAP46Q8IYW2 2715 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 IGSF10Q6WRI0 2623 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 LIPFP07098 398 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 AGAP20933 346 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 LY6G5BQ8NDX9 201 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 OR4P4Q8NGL7 312 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 PCGF1Q9BSM1 259 aa10.95□□□□□ -0.66
UBE4B-206ENST00000466379 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-206ENST00000466379 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-206ENST00000466379 PATZ1Q9HBE1 687 aaKnown RBP10.95□□□□□ -0.66
UBE4B-206ENST00000466379 PUS1Q9Y606 427 aaKnown RBP eCLIP10.95□□□□□ -0.66
UBE4B-206ENST00000466379 ACACBO00763 2458 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 CGB1A6NKQ9 187 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 BCL2P10415 239 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 RAB13P51153 203 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 MIC13Q5XKP0 118 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 OR5B3Q8NH48 314 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 GATAD1Q8WUU5 269 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 SSMEM1Q8WWF3 244 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 GGACTQ9BVM4 153 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 GGTLC1Q9BX51 225 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 RPS10P5Q9NQ39 176 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 NDUFA4L2Q9NRX3 87 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 FKBP11Q9NYL4 201 aa10.94□□□□□ -0.66
UBE4B-206ENST00000466379 IGHV1-3A0A0C4DH29 117 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 MBP02144 154 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 HSPB1P04792 205 aaKnown RBP10.93□□□□□ -0.66
UBE4B-206ENST00000466379 USF1P22415 310 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-206ENST00000466379 PAX6P26367 422 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 GPR6P46095 362 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-206ENST00000466379 KLRD1Q13241 179 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 MLANAQ16655 118 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 KHDC3LQ587J8 217 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 LDLRAD2Q5SZI1 272 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 TNFRSF14Q92956 283 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 RAB24Q969Q5 203 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 ACTR3CQ9C0K3 210 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-206ENST00000466379 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PRD5 423 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PRF3 423 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PRM7 423 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 YIF1AO95070 293 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 RNASE2P10153 161 aaKnown RBP10.93□□□□□ -0.66
UBE4B-206ENST00000466379 MC5RP33032 325 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 BEND2Q8NDZ0 799 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 NPVFQ9HCQ7 196 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 PXMP4Q9Y6I8 212 aa10.93□□□□□ -0.66
UBE4B-206ENST00000466379 LOC105371242A0A075B767 164 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 A6NNC1 897 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 MRGPRG-AS1Q2M3A8 158 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 ACOT6Q3I5F7 207 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-206ENST00000466379 VMA21Q3ZAQ7 101 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 OR1L8Q8NGR8 309 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 VSTM2AQ8TAG5 236 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 LSM4Q9Y4Z0 139 aaKnown RBP10.92□□□□□ -0.66
UBE4B-206ENST00000466379 MPDU1O75352 247 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 RBP4P02753 201 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 IGFBP2P18065 325 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 OPRK1P41145 380 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 CDC34P49427 236 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-206ENST00000466379 RPEQ96AT9 228 aa10.92□□□□□ -0.66
UBE4B-206ENST00000466379 LOC105371267A0A1B0GV96 52 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 hCG_1809904A0A1W2PP81 198 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PPE2 198 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PR64 198 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 A0A1W2PRV1 198 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 REG1AP05451 166 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 WT1-ASQ06250 92 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 BSXQ3C1V8 233 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 OR4A5Q8NH83 315 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 PLXNB1O43157 2135 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 H3BQ15 152 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 CYB5BO43169 146 aa10.91□□□□□ -0.66
UBE4B-206ENST00000466379 PRB1P04280 392 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms