RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 A0A1B0GX78 115 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 MEIS3P1A6NDR6 274 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 M0R036 132 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 AHSA1O95433 338 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 MSMBP08118 114 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 UBBP0CG47 229 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 PRB4P10163 310 aaPredicted RBP0.8□□□□□ -2.28
SSB-207ENST00000465871 FGF6P10767 208 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 CCL5P13501 91 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 DEFA1P59665 94 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 SPCS3P61009 180 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 RAB5BP61020 215 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 RPL18Q07020 188 aaKnown RBP0.8□□□□□ -2.28
SSB-207ENST00000465871 GUK1Q16774 197 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 FAM27BQ5VT28 67 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 C7orf65Q6ZTY9 151 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 OPTNQ96CV9 577 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 CCDC42Q96M95 316 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 NAA38Q9BRA0 125 aaKnown RBP0.8□□□□□ -2.28
SSB-207ENST00000465871 CHST6Q9GZX3 395 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 EFCAB1Q9HAE3 211 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 CISHQ9NSE2 258 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 IL36BQ9NZH7 164 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 RSL24D1Q9UHA3 163 aaKnown RBP0.8□□□□□ -2.28
SSB-207ENST00000465871 ADCY9O60503 1353 aa0.8□□□□□ -2.28
SSB-207ENST00000465871 FREM1Q5H8C1 2179 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 TRBV6-5A0A0K0K1A5 114 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 FABP5P3A8MUU1 101 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 PSMD12O00232 456 aaPredicted RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 CIAO1O76071 339 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 LYPLA2O95372 231 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 NAPSAO96009 420 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 IGHV3-7P01780 117 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 PRM2P04554 102 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 ZNF705BP0CI00 300 aaPredicted RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 HIST1H1EP10412 219 aaKnown RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 CD79AP11912 226 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 GPX2P18283 190 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 RPS4Y1P22090 263 aaKnown RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 AKR1C3P42330 323 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 EVX1P49640 407 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 MOGQ16653 247 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 FAM173BQ6P4H8 233 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 BPIFA4PQ86YQ2 179 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 ANKRD29Q8N6D5 301 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 MCFD2Q8NI22 146 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 SLC35B4Q969S0 331 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 PPP1R14BQ96C90 147 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 IMP4Q96G21 291 aaKnown RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 Q96M85 177 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 PPP1R2P1Q96PQ5 205 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 PARD6GQ9BYG4 376 aaPredicted RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 ULBP3Q9BZM4 244 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 WDR61Q9GZS3 305 aaKnown RBP0.79□□□□□ -2.28
SSB-207ENST00000465871 PARVGQ9HBI0 331 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 PKIGQ9Y2B9 76 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 SIPA1L1O43166 1804 aa0.79□□□□□ -2.28
SSB-207ENST00000465871 ZFHX2Q9C0A1 2572 aaPredicted RBP0.78□□□□□ -2.28
SSB-207ENST00000465871 PTPRBP23467 1997 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 MEIKINA0A087WXM9 373 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 TRBV10-2A0A0K0K1G8 114 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 IRGMA1A4Y4 181 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 TRAPPC2LH3BP13 241 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 SDCBPO00560 298 aaPredicted RBP0.78□□□□□ -2.28
SSB-207ENST00000465871 KRT75O95678 551 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 HLA-DRB1P01911 266 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 PMP2P02689 132 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 C1QAP02745 245 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 IFNA16P05015 189 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 RPS17P08708 135 aaKnown RBP0.78□□□□□ -2.28
SSB-207ENST00000465871 OR5G3P0C626 314 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 SULT1A1P50225 295 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 CEBPGP53567 150 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 SUPT4H1P63272 117 aaKnown RBP0.78□□□□□ -2.28
SSB-207ENST00000465871 HBA1P69905 142 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 OR2F1Q13607 317 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 NUMA1Q14980 2115 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 ELOBQ15370 118 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 HIST3H3Q16695 136 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 NDUFA5Q16718 116 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 ARHGAP11BQ3KRB8 267 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 AADACL3Q5VUY0 350 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 FP248Q71RG6 208 aaPredicted RBP0.78□□□□□ -2.28
SSB-207ENST00000465871 RPS19BP1Q86WX3 136 aaKnown RBP0.78□□□□□ -2.28
SSB-207ENST00000465871 TRAPPC5Q8IUR0 188 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 WFDC11Q8NEX6 87 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 OR8B3Q8NGG8 313 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 DNAJC9Q8WXX5 260 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 DCUN1D1Q96GG9 259 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 HSPB9Q9BQS6 159 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 GINS4Q9BRT9 223 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 COMMD5Q9GZQ3 224 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 VPS29Q9UBQ0 182 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 DCCP43146 1447 aa0.78□□□□□ -2.28
SSB-207ENST00000465871 BAZ2BQ9UIF8 2168 aaKnown RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 OR51F1A6NGY5 319 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 GOLGA6L19H0YKK7 550 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 FAAHO00519 579 aa0.77□□□□□ -2.29
SSB-207ENST00000465871 RPP14O95059 124 aaKnown RBP0.77□□□□□ -2.29
SSB-207ENST00000465871 CRYZL1O95825 349 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms