RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 ZNF502Q8TBZ5 544 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 LGALS14Q8TCE9 139 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 MARC2Q969Z3 335 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 RNF183Q96D59 192 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 VCX3BQ9H321 246 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 RHBDL2Q9NX52 303 aa7.21□□□□□ -1.26
USP39-212ENST00000465514 MRPL27Q9P0M9 148 aaKnown RBP7.21□□□□□ -1.26
USP39-212ENST00000465514 TRAV18A0A075B6X5 111 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 IGLC7A0M8Q6 106 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 UPK2O00526 184 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 RTL8CO15255 209 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 RBFOX2O43251 390 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP39-212ENST00000465514 ATF4P18848 351 aaPredicted RBP7.2□□□□□ -1.26
USP39-212ENST00000465514 PTBP1P26599 531 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP39-212ENST00000465514 PSMB9P28065 219 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 ELLP55199 621 aaPredicted RBP7.2□□□□□ -1.26
USP39-212ENST00000465514 TAS2R31P59538 309 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 UBE2UQ5VVX9 321 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 SFXN4Q6P4A7 337 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 ZNF773Q6PK81 442 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 PLET1Q6UQ28 207 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 HOGA1Q86XE5 327 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 WFDC3Q8IUB2 231 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 SLC38A6Q8IZM9 456 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 OR2C3Q8N628 320 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 OR10W1Q8NGF6 305 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 ZNF436Q9C0F3 470 aaPredicted RBP7.2□□□□□ -1.26
USP39-212ENST00000465514 COMMD5Q9GZQ3 224 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 SLC5A7Q9GZV3 580 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 UFC1Q9Y3C8 167 aa7.2□□□□□ -1.26
USP39-212ENST00000465514 TGOLN2O43493 480 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 SPRY2O43597 315 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 MRPS14O60783 128 aaKnown RBP7.19□□□□□ -1.26
USP39-212ENST00000465514 HPRT1P00492 218 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 PPYP01298 95 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 FCER2P06734 321 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 CLEC2LP0C7M8 214 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 RPA2P15927 270 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 NQO2P16083 231 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 SDC2P34741 201 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 APOC4P55056 127 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 FXYD4P59646 89 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 GABARAPL2P60520 117 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 MXD1Q05195 221 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 POU2AF1Q16633 256 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 SPARTQ8N0X7 666 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 OR5H6Q8NGV6 325 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 SLC25A38Q96DW6 304 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 SRSF8Q9BRL6 282 aaKnown RBP7.19□□□□□ -1.26
USP39-212ENST00000465514 QTRT1Q9BXR0 403 aaKnown RBP7.19□□□□□ -1.26
USP39-212ENST00000465514 C5orf66Q9H5L9 145 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 TMEM140Q9NV12 185 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 THYN1Q9P016 225 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 UBQLN2Q9UHD9 624 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 SSR3Q9UNL2 185 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
USP39-212ENST00000465514 TEX50A0A1B0GTY4 177 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 OR2T8A6NH00 312 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 UBE2CO00762 179 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 TSPAN4O14817 238 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 S1PR2O95136 353 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 TRAPPC2P0DI81 140 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 TRAPPC2BP0DI82 140 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 OR13C7P0DN81 318 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 BMI1P35226 326 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 CATR1Q13166 79 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 DEFB135Q30KP9 77 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 IDNKQ5T6J7 187 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 AADACL3Q5VUY0 350 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 SLC25A24Q6NUK1 477 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 ZNF818PQ6ZRF7 136 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 Q6ZWC4 215 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 TMEM217Q8N7C4 229 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 GDPD1Q8N9F7 314 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 DMBX1Q8NFW5 382 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 OR51H1Q8NH63 302 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 CD300LFQ8TDQ1 290 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 VN1R17PQ8TDU5 208 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 TMEM190Q8WZ59 177 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 SPAG8Q99932 426 aaPredicted RBP7.18□□□□□ -1.26
USP39-212ENST00000465514 AUNIPQ9H7T9 357 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 PLEKHA2Q9HB19 425 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 RAB26Q9ULW5 256 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 ETV7Q9Y603 341 aa7.18□□□□□ -1.26
USP39-212ENST00000465514 A0A0A6YYH2 397 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 A6NJ64 397 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 CYB5BO43169 146 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 CDK2AP2O75956 126 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 SERPINE2P07093 398 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 FGF2P09038 288 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 SCAND1P57086 179 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 WT1-ASQ06250 92 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 LAMTOR1Q6IAA8 161 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 TMEM17Q86X19 198 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 STPG3Q8N7X2 389 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 OR5AP2Q8NGF4 316 aa7.17□□□□□ -1.26
USP39-212ENST00000465514 GIMAP1Q8WWP7 306 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms