RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZNF48Q96MX3 618 aaPredicted RBP13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 NIPBLQ6KC79 2804 aaeCLIP13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 HBG1P69891 147 aa13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 HBG2P69892 147 aa13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 HSD17B11Q8NBQ5 300 aa13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 RBKSQ9H477 322 aa13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 PRDM13Q9H4Q3 707 aa13.57□□□□□ -0.24
EXOSC3-203ENST00000465229 FCGR3BO75015 233 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 SCAF4O95104 1147 aaKnown RBP13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 SRD5A1P18405 259 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 CD24P25063 80 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 ATP6V0CP27449 155 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 CD1BP29016 333 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 TMEM14EPQ6UXP3 125 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 Q6ZRG5 221 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 BPIFCQ8NFQ6 507 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 OR4S2Q8NH73 311 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 PIFOQ8TCI5 191 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 HRH4Q9H3N8 390 aa13.56□□□□□ -0.24
EXOSC3-203ENST00000465229 OR8U8P0C7N1 319 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 IAPPP10997 89 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 NQO2P16083 231 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 BRS3P32247 399 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 MC5RP33032 325 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 TAGLNQ01995 201 aaKnown RBP13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 TMEM217Q8N7C4 229 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 SSX3Q99909 188 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 SH3BGRL3Q9H299 93 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 SLC35D1Q9NTN3 355 aa13.55□□□□□ -0.24
EXOSC3-203ENST00000465229 TMEM218A2RU14 115 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 H3BP45 60 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 VENTXO95231 258 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 IFNA5P01569 189 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 IGKV1-16P04430 117 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 M6PRP20645 277 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 ERVK-16P61578 105 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 LRRC75BQ2VPJ9 315 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 PDLIM3Q53GG5 364 aaPredicted RBP13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 FBLN7Q53RD9 439 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 OR52E5Q8NH55 327 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 HIPK2Q9H2X6 1198 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 WASHC3Q9Y3C0 194 aa13.54□□□□□ -0.24
EXOSC3-203ENST00000465229 H7C2Y5 167 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 CRYZL1O95825 349 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 APOA2P02652 100 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 CAMLGP49069 296 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 TMEM267Q0VDI3 215 aaPredicted RBP13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 Q6YL49 198 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 THNSL2Q86YJ6 484 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 SIGLECL1Q8N7X8 197 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 OR2G3Q8NGZ4 309 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 ZDHHC16Q969W1 377 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 RITA1Q96K30 269 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 CRLF1O75462 422 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 IGKV1D-33P01593 117 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 IGKV1-33P01594 117 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 SNRNP70P08621 437 aaKnown RBP13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 IER3P46695 156 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 SCGB2A2Q13296 93 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 EBI3Q14213 229 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 ATP6V1FQ16864 119 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 RTL8BQ17RB0 113 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 C10orf91Q5T1B1 145 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 PDPNQ86YL7 162 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
EXOSC3-203ENST00000465229 H3BUX3 64 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 TSPAN15O95858 294 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 IGHV4-59P01825 116 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 PRH1P02810 166 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 CD5P06127 495 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 HNF4GQ14541 408 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 SPANXN5Q5MJ07 72 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 DHRS7BQ6IAN0 325 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM182Q6ZP80 229 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 HAPLN4Q86UW8 402 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 LFNGQ8NES3 379 aa13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 FLYWCH2Q96CP2 140 aaKnown RBP13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 EAF1Q96JC9 268 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 PSMG3Q9BT73 122 aaPredicted RBP13.52□□□□□ -0.25
EXOSC3-203ENST00000465229 OR9G9P0C7N8 305 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 SPCS3P61009 180 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 ARL16Q0P5N6 197 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 ZNF429Q86V71 674 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 OR4C13Q8NGP0 309 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 OR2T10Q8NGZ9 312 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 JMJD1CQ15652 2540 aa13.51□□□□□ -0.25
EXOSC3-203ENST00000465229 BTBD17A6NE02 478 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 RBMXL2O75526 392 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 MOSP00540 346 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 SNCAP37840 140 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 RPS16P62249 146 aaKnown RBP13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 HES1Q14469 280 aa13.5□□□□□ -0.25
EXOSC3-203ENST00000465229 PUSL1Q8N0Z8 303 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms