RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TIMM22Q9Y584 194 aa0.51□□□□□ -2.33
NUCKS1-202ENST00000464938 LHFPL6Q9Y693 200 aa0.51□□□□□ -2.33
NUCKS1-202ENST00000464938 BRWD1Q9NSI6 2320 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 KMT2BQ9UMN6 2715 aaPredicted RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 NOS1APO75052 506 aaPredicted RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 DCTN3O75935 186 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 AHSA1O95433 338 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 IFNA5P01569 189 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 IGKV1-5P01602 117 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 PPBPP02775 128 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 SULT1A3P0DMM9 295 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 SULT1A4P0DMN0 295 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 HIST1H1EP10412 219 aaKnown RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 MSNP26038 577 aaKnown RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 MAGEA12P43365 314 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 CSN1S1P47710 185 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 CCL20P78556 96 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 IFITM2Q01629 132 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 RPL18Q07020 188 aaKnown RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 PMAIP1Q13794 54 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 IMPG1Q17R60 797 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 C9orf64Q5T6V5 341 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 GLT8D1Q68CQ7 371 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 FAM173BQ6P4H8 233 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 FP248Q71RG6 208 aaPredicted RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 SLC36A1Q7Z2H8 476 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 Q8N2B8 174 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 TMEM86AQ8N2M4 240 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 TBC1D19Q8N5T2 526 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 DDI1Q8WTU0 396 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 EFCAB1Q9HAE3 211 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 CISHQ9NSE2 258 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 PAQR5Q9NXK6 330 aaPredicted RBP0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 NAT8Q9UHE5 227 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 COL6A6A6NMZ7 2263 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 PTPRBP23467 1997 aa0.5□□□□□ -2.33
NUCKS1-202ENST00000464938 NEO1Q92859 1461 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 IGKV1D-43A0A0B4J1Z2 117 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 A0A0J9YY10 115 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 A0A1B0GV50 99 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 A0A1B0GX78 115 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 NIPSNAP2O75323 286 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 TRGC1P0CF51 173 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 RNASE3P12724 160 aaKnown RBP0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 KCNE1P15382 129 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 S100A7P31151 101 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 G6PCP35575 357 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 HAAOP46952 286 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 FXYD2P54710 66 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 SUPT4H1P63272 117 aaKnown RBP0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 UBE2IP63279 158 aaKnown RBP0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 ELOBQ15370 118 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 IBA57Q5T440 356 aaKnown RBP0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 Q6ZS49 121 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 DHFR2Q86XF0 187 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 IQCF2Q8IXL9 164 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 LRRC25Q8N386 305 aaPredicted RBP0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 OR2T4Q8NH00 348 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 MRPL30Q8TCC3 161 aaKnown RBP0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 ACOT12Q8WYK0 555 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 PARVGQ9HBI0 331 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 MED9Q9NWA0 146 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 IL36BQ9NZH7 164 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 TP73-AS1Q9UF72 201 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 GUCA1BQ9UMX6 200 aa0.49□□□□□ -2.33
NUCKS1-202ENST00000464938 TOPBP1Q92547 1522 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 PLB1Q6P1J6 1458 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 GREB1Q4ZG55 1949 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 WRNQ14191 1432 aaPredicted RBP eCLIP0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 NUP155O75694 1391 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 MAST2Q6P0Q8 1798 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 TRBV20OR9-2A0A075B6H5 130 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 IRGMA1A4Y4 181 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 GGT3PA6NGU5 568 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 EEF1E1-BLOC1S5C9J1V9 151 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 KCNK1O00180 336 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 SLC22A1O15245 554 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 CRPP02741 224 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 PRM2P04554 102 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 CALB1P05937 261 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 RPSAP08865 295 aaKnown RBP0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 HIST1H1TP22492 207 aaPredicted RBP0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 NFYAP23511 347 aaPredicted RBP0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 TCL1AP56279 114 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 ZNF345Q14585 488 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 KISS1Q15726 138 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 C10orf55Q5SWW7 151 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 DCXRQ7Z4W1 244 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 ZNF676Q8N7Q3 588 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 OR8B3Q8NGG8 313 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 OR13C4Q8NGS5 318 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 PFN4Q8NHR9 129 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 C10orf105Q8TEF2 133 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 KLK6Q92876 244 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 ARL5BQ96KC2 179 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 ADAT1Q9BUB4 502 aaKnown RBP0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 DERL1Q9BUN8 251 aa0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 WDR61Q9GZS3 305 aaKnown RBP0.48□□□□□ -2.33
NUCKS1-202ENST00000464938 CST9LQ9H4G1 147 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 191.1 ms