RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 TRAV18A0A075B6X5 111 aa16.74■□□□□ 0.27
USP4-208ENST00000464168 CATR1Q13166 79 aa16.74■□□□□ 0.27
USP4-208ENST00000464168 IZUMO2Q6UXV1 221 aa16.74■□□□□ 0.27
USP4-208ENST00000464168 GDPD1Q8N9F7 314 aa16.74■□□□□ 0.27
USP4-208ENST00000464168 SLC25A38Q96DW6 304 aa16.74■□□□□ 0.27
USP4-208ENST00000464168 PLEKHA2Q9HB19 425 aa16.74■□□□□ 0.27
USP4-208ENST00000464168 S1PR2O95136 353 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 SERPINE2P07093 398 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 OR13C7P0DN81 318 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 HSPA13P48723 471 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 FXYD4P59646 89 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 WT1-ASQ06250 92 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 ZNF818PQ6ZRF7 136 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 STPG3Q8N7X2 389 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 DMBX1Q8NFW5 382 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 OR5H6Q8NGV6 325 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 OR51H1Q8NH63 302 aa16.73■□□□□ 0.27
USP4-208ENST00000464168 BSCL2Q96G97 398 aaPredicted RBP16.73■□□□□ 0.27
USP4-208ENST00000464168 KLK5Q9Y337 293 aaPredicted RBP16.73■□□□□ 0.27
USP4-208ENST00000464168 TEX50A0A1B0GTY4 177 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 FCER2P06734 321 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 TRAPPC2P0DI81 140 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 TRAPPC2BP0DI82 140 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 PSMB9P28065 219 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 MFAP2P55001 183 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 LAMTOR1Q6IAA8 161 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 SLC25A24Q6NUK1 477 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 RPP25LQ8N5L8 163 aaKnown RBP16.72■□□□□ 0.27
USP4-208ENST00000464168 CD300LFQ8TDQ1 290 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 GIMAP1Q8WWP7 306 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 CHRDL1Q9BU40 450 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 VCX3BQ9H321 246 aa16.72■□□□□ 0.27
USP4-208ENST00000464168 CYB5BO43169 146 aa16.71■□□□□ 0.27
USP4-208ENST00000464168 MRPS14O60783 128 aaKnown RBP16.71■□□□□ 0.27
USP4-208ENST00000464168 RPL35AP18077 110 aaKnown RBP16.71■□□□□ 0.27
USP4-208ENST00000464168 SDC2P34741 201 aa16.71■□□□□ 0.27
USP4-208ENST00000464168 GABARAPL2P60520 117 aa16.71■□□□□ 0.27
USP4-208ENST00000464168 THOC7Q6I9Y2 204 aaKnown RBP16.71■□□□□ 0.27
USP4-208ENST00000464168 SPSB3Q6PJ21 355 aa16.71■□□□□ 0.27
USP4-208ENST00000464168 SPARTQ8N0X7 666 aa16.71■□□□□ 0.27
USP4-208ENST00000464168 SSR3Q9UNL2 185 aa16.71■□□□□ 0.27
USP4-208ENST00000464168 IGHV3OR16-8A0A075B7F1 116 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 IGHV3-21A0A0B4J1V1 117 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 F8W735 103 aaPredicted RBP16.7■□□□□ 0.26
USP4-208ENST00000464168 NDUFA4O00483 81 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 CLEC2LP0C7M8 214 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 ADMP35318 185 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 AADACL3Q5VUY0 350 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 HSD17B13Q7Z5P4 300 aaPredicted RBP16.7■□□□□ 0.26
USP4-208ENST00000464168 SCARB1Q8WTV0 552 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 C20orf24Q9BUV8 137 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 AUNIPQ9H7T9 357 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 MAP6D1Q9H9H5 199 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 NDUFA4L2Q9NRX3 87 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 COMMD9Q9P000 198 aa16.7■□□□□ 0.26
USP4-208ENST00000464168 OR4C46A6NHA9 309 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 K7EMT4 169 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 ZNF207O43670 478 aaKnown RBP16.69■□□□□ 0.26
USP4-208ENST00000464168 GNRHRP30968 328 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 SCAND1P57086 179 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 MXD1Q05195 221 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 TMEM17Q86X19 198 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 TMEM217Q8N7C4 229 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 OR5AP2Q8NGF4 316 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 OR1L8Q8NGR8 309 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 GALNT14Q96FL9 552 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 ATP6V0BQ99437 205 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 C21orf62Q9NYP8 219 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 ETV7Q9Y603 341 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 F11RQ9Y624 299 aaKnown RBP16.69■□□□□ 0.26
USP4-208ENST00000464168 HERC2O95714 4834 aa16.69■□□□□ 0.26
USP4-208ENST00000464168 A0A0A6YYH2 397 aa16.68■□□□□ 0.26
USP4-208ENST00000464168 A6NJ64 397 aa16.68■□□□□ 0.26
USP4-208ENST00000464168 CTSDP07339 412 aaPredicted RBP16.68■□□□□ 0.26
USP4-208ENST00000464168 OR5B3Q8NH48 314 aa16.68■□□□□ 0.26
USP4-208ENST00000464168 PHLDA1Q8WV24 401 aaPredicted RBP16.68■□□□□ 0.26
USP4-208ENST00000464168 RNF167Q9H6Y7 350 aa16.68■□□□□ 0.26
USP4-208ENST00000464168 K7EIM0 57 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 FCGR2BP31994 310 aaPredicted RBP16.67■□□□□ 0.26
USP4-208ENST00000464168 IDNKQ5T6J7 187 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 APRG1Q8IVJ8 170 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 ZNF414Q96IQ9 312 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 HINT2Q9BX68 163 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 SMPXQ9UHP9 88 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 RAB26Q9ULW5 256 aa16.67■□□□□ 0.26
USP4-208ENST00000464168 MARCH11A6NNE9 402 aa16.66■□□□□ 0.26
USP4-208ENST00000464168 DEDDO75618 318 aa16.66■□□□□ 0.26
USP4-208ENST00000464168 F2RP25116 425 aa16.66■□□□□ 0.26
USP4-208ENST00000464168 ERVK-16P61578 105 aa16.66■□□□□ 0.26
USP4-208ENST00000464168 FCGR1BQ92637 280 aa16.66■□□□□ 0.26
USP4-208ENST00000464168 LSM10Q969L4 123 aaKnown RBP16.66■□□□□ 0.26
USP4-208ENST00000464168 NSG2Q9Y328 171 aa16.66■□□□□ 0.26
USP4-208ENST00000464168 MEIS3P1A6NDR6 274 aa16.65■□□□□ 0.26
USP4-208ENST00000464168 C15orf62A8K5M9 175 aa16.65■□□□□ 0.26
USP4-208ENST00000464168 PGLYRP1O75594 196 aaPredicted RBP16.65■□□□□ 0.26
USP4-208ENST00000464168 CTSGP08311 255 aa16.65■□□□□ 0.26
USP4-208ENST00000464168 CBX5P45973 191 aa16.65■□□□□ 0.26
USP4-208ENST00000464168 LGALS9CQ6DKI2 356 aa16.65■□□□□ 0.26
USP4-208ENST00000464168 DHRS11Q6UWP2 260 aa16.65■□□□□ 0.26
USP4-208ENST00000464168 UBAC2Q8NBM4 344 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms