RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CHRDL1Q9BU40 450 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 RHPN1-AS1Q9BWJ2 59 aa10.56□□□□□ -0.72
SMC1A-204ENST00000463684 PKHD1P08F94 4074 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 IGHV4-4A0A075B6R2 117 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 TRAV10A0A0B4J240 114 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 PDCD5O14737 125 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 CHEK1O14757 476 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 SERPINE2P07093 398 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 CDNFQ49AH0 187 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 CNIH2Q6PI25 160 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 HSD17B13Q7Z5P4 300 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-204ENST00000463684 SPAG16Q8N0X2 631 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 GDPD1Q8N9F7 314 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 OR10W1Q8NGF6 305 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 GPHA2Q96T91 129 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
SMC1A-204ENST00000463684 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 DCSTAMPQ9H295 470 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 ELF5Q9UKW6 265 aaPredicted RBP10.55□□□□□ -0.72
SMC1A-204ENST00000463684 FAT2Q9NYQ8 4349 aa10.55□□□□□ -0.72
SMC1A-204ENST00000463684 IGHV3-21A0A0B4J1V1 117 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 IGHV7-4-1A0A0J9YVY3 117 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 C15orf61A6NNL5 157 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 UPK2O00526 184 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 TNFSF12O43508 249 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 TRAPPC2P0DI81 140 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 OR13C7P0DN81 318 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 HLA-DMBP28068 263 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 TAS2R31P59538 309 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 Q56UQ5 140 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 PVRIGQ6DKI7 326 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 THOC7Q6I9Y2 204 aaKnown RBP10.54□□□□□ -0.72
SMC1A-204ENST00000463684 GBGT1Q8N5D6 347 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 SCN3BQ9NY72 215 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 DNAH2Q9P225 4427 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 ABCA13Q86UQ4 5058 aa10.54□□□□□ -0.72
SMC1A-204ENST00000463684 TRAV3A0A0B4J244 114 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 M0R2N4 97 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 YIF1AO95070 293 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 HPRT1P00492 218 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 P0DMU3 169 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 FAM231AP0DMU4 169 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 FAM231CP0DMU5 169 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 NQO2P16083 231 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 FABP5Q01469 135 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 RELQ04864 619 aaPredicted RBP10.53□□□□□ -0.72
SMC1A-204ENST00000463684 HACD4Q5VWC8 232 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 POM121L12Q8N7R1 296 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 Q8NAQ8 132 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 DMBX1Q8NFW5 382 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 RNF126Q9BV68 326 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 ACOT13Q9NPJ3 140 aa10.53□□□□□ -0.72
SMC1A-204ENST00000463684 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 IFITM5A6NNB3 132 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
SMC1A-204ENST00000463684 SULT1C2O00338 296 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 RTL8CO15255 209 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 RBFOX2O43251 390 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMC1A-204ENST00000463684 CD5P06127 495 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 FGF2P09038 288 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 Q6ZTC4 211 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 STHQ8IWL8 128 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 SECTM1Q8WVN6 248 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 CCDC90BQ9GZT6 254 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 ANXA10Q9UJ72 324 aa10.52□□□□□ -0.73
SMC1A-204ENST00000463684 F11RQ9Y624 299 aaKnown RBP10.52□□□□□ -0.73
SMC1A-204ENST00000463684 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 TEX50A0A1B0GTY4 177 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 NUPL2O15504 423 aaKnown RBP10.51□□□□□ -0.73
SMC1A-204ENST00000463684 DFFBO76075 338 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 CTSGP08311 255 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 RBMY1A1P0DJD3 496 aaKnown RBP10.51□□□□□ -0.73
SMC1A-204ENST00000463684 RBMY1CP0DJD4 496 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 MIFP14174 115 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 OR10A3P58181 314 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 CATR1Q13166 79 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
SMC1A-204ENST00000463684 MSMO1Q15800 293 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 POU2AF1Q16633 256 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 ZBTB34Q8NCN2 500 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 OR1L8Q8NGR8 309 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 HINT2Q9BX68 163 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 KRTAP4-5Q9BYR2 181 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 TMEM140Q9NV12 185 aa10.51□□□□□ -0.73
SMC1A-204ENST00000463684 TRAV1-2A0A0B4J238 106 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 F8W735 103 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-204ENST00000463684 EIF4EP06730 217 aaKnown RBP10.5□□□□□ -0.73
SMC1A-204ENST00000463684 GNG2P59768 71 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 DEFB131AP59861 70 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 MLLT11Q13015 90 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-204ENST00000463684 TMEM41BQ5BJD5 291 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 FAM90A2PQ658T7 463 aa10.5□□□□□ -0.73
SMC1A-204ENST00000463684 LEMD1Q68G75 181 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms