RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ENSAO43768 121 aaKnown RBP10.34□□□□□ -0.75
VAPB-203ENST00000463370 LY86O95711 162 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 SRP19P09132 144 aaKnown RBP10.34□□□□□ -0.75
VAPB-203ENST00000463370 IGFBP2P18065 325 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 PAX6P26367 422 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 RPL8P62917 257 aaKnown RBP10.34□□□□□ -0.75
VAPB-203ENST00000463370 PNKDQ8N490 385 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 CYB561D1Q8N8Q1 229 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 CLEC7AQ9BXN2 247 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 SLC25A17O43808 307 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 RNF224P0DH78 156 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 RAB11AP62491 216 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 FAM122CQ6P4D5 195 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 ZNF709Q8N972 641 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 PCGF1Q9BSM1 259 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 ZNF430Q9H8G1 570 aaPredicted RBP10.34□□□□□ -0.75
VAPB-203ENST00000463370 PATZ1Q9HBE1 687 aaKnown RBP10.34□□□□□ -0.75
VAPB-203ENST00000463370 NDUFA4L2Q9NRX3 87 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 AKAP6Q13023 2319 aa10.34□□□□□ -0.75
VAPB-203ENST00000463370 USP9XQ93008 2570 aaPredicted RBP10.34□□□□□ -0.75
VAPB-203ENST00000463370 YIF1AO95070 293 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 LIPFP07098 398 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 MLANAQ16655 118 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 AWAT1Q58HT5 328 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 OR5B3Q8NH48 314 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 TMEM167AQ8TBQ9 72 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 LSM4Q9Y4Z0 139 aaKnown RBP10.33□□□□□ -0.76
VAPB-203ENST00000463370 IGHV1-3A0A0C4DH29 117 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 DLK1P80370 383 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 KLRD1Q13241 179 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 MIC13Q5XKP0 118 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 SSMEM1Q8WWF3 244 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 TNFRSF14Q92956 283 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 RAB24Q969Q5 203 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 GGACTQ9BVM4 153 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 SSBP3Q9BWW4 388 aaPredicted RBP10.33□□□□□ -0.76
VAPB-203ENST00000463370 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 COMMD5Q9GZQ3 224 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 ARHGAP32A7KAX9 2087 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 ZFHX3Q15911 3703 aa10.33□□□□□ -0.76
VAPB-203ENST00000463370 A0A1W2PPH5 198 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 A6NNC1 897 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 RNASE2P10153 161 aaKnown RBP10.32□□□□□ -0.76
VAPB-203ENST00000463370 BCL2P10415 239 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 ZFP36P26651 326 aaKnown RBP10.32□□□□□ -0.76
VAPB-203ENST00000463370 IL3RAP26951 378 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 RAB13P51153 203 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 PRRX1P54821 245 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 BSXQ3C1V8 233 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 SOHLH1Q5JUK2 328 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 BEND2Q8NDZ0 799 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 LOC105371242A0A075B767 164 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 C17orf112F2Z3M2 114 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 RBP4P02753 201 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 PRB1P04280 392 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 HSPB1P04792 205 aaKnown RBP10.32□□□□□ -0.76
VAPB-203ENST00000463370 SNRNP70P08621 437 aaKnown RBP10.32□□□□□ -0.76
VAPB-203ENST00000463370 USF1P22415 310 aaPredicted RBP10.32□□□□□ -0.76
VAPB-203ENST00000463370 WT1-ASQ06250 92 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 FKBP11Q9NYL4 201 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 INSIG2Q9Y5U4 225 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 PUS1Q9Y606 427 aaKnown RBP eCLIP10.32□□□□□ -0.76
VAPB-203ENST00000463370 CACNA1BQ00975 2339 aa10.32□□□□□ -0.76
VAPB-203ENST00000463370 CTXND1A0A1B0GTU2 59 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 LY6LH3BQJ8 138 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 M0R036 132 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 MC5RP33032 325 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 GPR6P46095 362 aaPredicted RBP10.31□□□□□ -0.76
VAPB-203ENST00000463370 KHDC3LQ587J8 217 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 NPVFQ9HCQ7 196 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 PXMP4Q9Y6I8 212 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 IGKV1OR2-108A0A075B7D4 117 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 A0A1W2PRD5 423 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 A0A1W2PRF3 423 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 A0A1W2PRM7 423 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 MBP02144 154 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 ATF4P18848 351 aaPredicted RBP10.31□□□□□ -0.76
VAPB-203ENST00000463370 HCP5Q6MZN7 132 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 OR1L8Q8NGR8 309 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
VAPB-203ENST00000463370 CRYBG3Q68DQ2 2970 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 C7orf77A4D0Y5 90 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 FBLN7Q53RD9 439 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 C2orf83Q53S99 150 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 C19orf35Q6ZS72 473 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 LHFPL4Q7Z7J7 247 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 RPEQ96AT9 228 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
VAPB-203ENST00000463370 LOC105371267A0A1B0GV96 52 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 A0A1W2PPI3 338 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 MPDU1O75352 247 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 REG1AP05451 166 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 APELAP0DMC3 54 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 OPRK1P41145 380 aa10.3□□□□□ -0.76
VAPB-203ENST00000463370 ACOT6Q3I5F7 207 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms