RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ZNF124Q15973 351 aa7.94□□□□□ -1.14
CBX3-205ENST00000462165 CNIH2Q6PI25 160 aa7.94□□□□□ -1.14
CBX3-205ENST00000462165 SPSB3Q6PJ21 355 aa7.94□□□□□ -1.14
CBX3-205ENST00000462165 GPHA2Q96T91 129 aa7.94□□□□□ -1.14
CBX3-205ENST00000462165 DCSTAMPQ9H295 470 aa7.94□□□□□ -1.14
CBX3-205ENST00000462165 C15orf62A8K5M9 175 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 IGLL5B9A064 214 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 C11orf94C9JXX5 98 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 UPK2O00526 184 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 CYB5BO43169 146 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 RBFOX2O43251 390 aaKnown RBP eCLIP7.93□□□□□ -1.14
CBX3-205ENST00000462165 FGF2P09038 288 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 HSMCR30P0CW71 290 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 OR10A3P58181 314 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 MLLT11Q13015 90 aaPredicted RBP7.93□□□□□ -1.14
CBX3-205ENST00000462165 POU2AF1Q16633 256 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 CDNFQ49AH0 187 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 THOC7Q6I9Y2 204 aaKnown RBP7.93□□□□□ -1.14
CBX3-205ENST00000462165 GDPD1Q8N9F7 314 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 CHRDL1Q9BU40 450 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 C20orf24Q9BUV8 137 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 COMMD5Q9GZQ3 224 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 HRASLSQ9HDD0 168 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 SCN3BQ9NY72 215 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 ETV7Q9Y603 341 aa7.93□□□□□ -1.14
CBX3-205ENST00000462165 TRAV1-2A0A0B4J238 106 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 TRAV3A0A0B4J244 114 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 IFITM5A6NNB3 132 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 PDCD5O14737 125 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 DEFB4AO15263 64 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 SERPINE2P07093 398 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 TAS2R31P59538 309 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 MSMO1Q15800 293 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 HACD4Q5VWC8 232 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 SPAG16Q8N0X2 631 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 OR10W1Q8NGF6 305 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 RNF2Q99496 336 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 QTRT1Q9BXR0 403 aaKnown RBP7.92□□□□□ -1.14
CBX3-205ENST00000462165 ACOT13Q9NPJ3 140 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 SMPXQ9UHP9 88 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 ANXA10Q9UJ72 324 aa7.92□□□□□ -1.14
CBX3-205ENST00000462165 IGHV3OR16-8A0A075B7F1 116 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
CBX3-205ENST00000462165 CHEK1O14757 476 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 TNFSF12O43508 249 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 XRCC3O43542 346 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 ZNF207O43670 478 aaKnown RBP7.91□□□□□ -1.14
CBX3-205ENST00000462165 HPRT1P00492 218 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 NQO2P16083 231 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 TMEM187Q14656 261 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 OGFRL1Q5TC84 451 aaPredicted RBP7.91□□□□□ -1.14
CBX3-205ENST00000462165 SLC25A24Q6NUK1 477 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 HSD17B13Q7Z5P4 300 aaPredicted RBP7.91□□□□□ -1.14
CBX3-205ENST00000462165 ZBTB34Q8NCN2 500 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 SCARB1Q8WTV0 552 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 ZNF414Q96IQ9 312 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 RHPN1-AS1Q9BWJ2 59 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 ATG5Q9H1Y0 275 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 HRH4Q9H3N8 390 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 DUSP21Q9H596 190 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 CCL28Q9NRJ3 127 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 C21orf62Q9NYP8 219 aa7.91□□□□□ -1.14
CBX3-205ENST00000462165 IGHV7-4-1A0A0J9YVY3 117 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 SULT1C2O00338 296 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 MRPS14O60783 128 aaKnown RBP7.9□□□□□ -1.14
CBX3-205ENST00000462165 CA1P00915 261 aaPredicted RBP7.9□□□□□ -1.14
CBX3-205ENST00000462165 TRAPPC2P0DI81 140 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 TRAPPC2BP0DI82 140 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 OR13C7P0DN81 318 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 RAB3BP20337 219 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 TFPI2P48307 235 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 WT1-ASQ06250 92 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 CATR1Q13166 79 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 FAM90A2PQ658T7 463 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 ZNF773Q6PK81 442 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 NR2C2APQ86WQ0 139 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 Q8NAQ8 132 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 NUDCD2Q8WVJ2 157 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 SECTM1Q8WVN6 248 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 OR10C1Q96KK4 312 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 MGLLQ99685 303 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 TMEM140Q9NV12 185 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 TPRKBQ9Y3C4 175 aa7.9□□□□□ -1.14
CBX3-205ENST00000462165 F11RQ9Y624 299 aaKnown RBP7.9□□□□□ -1.14
CBX3-205ENST00000462165 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 IGHV3-21A0A0B4J1V1 117 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 TEX50A0A1B0GTY4 177 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 TMEM235A6NFC5 223 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 C15orf61A6NNL5 157 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 K7EIM0 57 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 CASQ2O14958 399 aaPredicted RBP7.89□□□□□ -1.15
CBX3-205ENST00000462165 RGS10O43665 173 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 SSX5O60225 188 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 CTSGP08311 255 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 MYL9P24844 172 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 UBAC2Q8NBM4 344 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 TMEM116Q8NCL8 245 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 DMBX1Q8NFW5 382 aa7.89□□□□□ -1.15
CBX3-205ENST00000462165 OR1L8Q8NGR8 309 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms