RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 C8orf88P0DMB2 117 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 ARL3P36405 182 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 LSM3P62310 102 aaKnown RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 ZNF585BQ52M93 769 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 AADACL3Q5VUY0 350 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 TMEM17Q86X19 198 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 CMTM1Q8IZ96 169 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 OR5H2Q8NGV7 314 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 OR51H1Q8NH63 302 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 ZNF502Q8TBZ5 544 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 VN1R17PQ8TDU5 208 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 MARC2Q969Z3 335 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 DGCR14Q96DF8 476 aaKnown RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 ATP6V0BQ99437 205 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 NEURL2Q9BR09 285 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 QTRT1Q9BXR0 403 aaKnown RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 SCPEP1Q9HB40 452 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 NDUFA4L2Q9NRX3 87 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 FAM212BQ9NTI7 297 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-207ENST00000461798 THYN1Q9P016 225 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 DNAH7Q8WXX0 4024 aa6.9□□□□□ -1.3
BRCA1-207ENST00000461798 RYR3Q15413 4870 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 MFSD2BA6NFX1 497 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 MARCH11A6NNE9 402 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 GPR31O00270 319 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 TPPPO94811 219 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 REG1AP05451 166 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 EIF4EP06730 217 aaKnown RBP6.89□□□□□ -1.31
BRCA1-207ENST00000461798 SERPINE2P07093 398 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 LYL1P12980 280 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 LPAR6P43657 344 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 UCP3P55916 312 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 CD81P60033 236 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 WT1-ASQ06250 92 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 LPCAT3Q6P1A2 487 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 DMBX1Q8NFW5 382 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 DYNLRB2Q8TF09 96 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 FCAMRQ8WWV6 532 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 FUNDC2Q9BWH2 189 aa6.89□□□□□ -1.31
BRCA1-207ENST00000461798 DYNC2H1Q8NCM8 4307 aaKnown RBP6.88□□□□□ -1.31
BRCA1-207ENST00000461798 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 SMIM31A0A1B0GVY4 71 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF320A2RRD8 509 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 CYB5BO43169 146 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 KRASP01116 189 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 RLN1P04808 185 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 IFNA6P05013 189 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 CD7P09564 240 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 EDN2P20800 178 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 HLA-DMAP28067 261 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 HRH1P35367 487 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 ERVK-16P61578 105 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 NCS1P62166 190 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 UXS1Q8NBZ7 420 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 OR1L6Q8NGR2 347 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 ISOC1Q96CN7 298 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF436Q9C0F3 470 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-207ENST00000461798 FXYD6Q9H0Q3 95 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 HIPK2Q9H2X6 1198 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 PALMDQ9NP74 551 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 FKBP11Q9NYL4 201 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 MRPL27Q9P0M9 148 aaKnown RBP6.88□□□□□ -1.31
BRCA1-207ENST00000461798 COMMD3Q9UBI1 195 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 F11RQ9Y624 299 aaKnown RBP6.88□□□□□ -1.31
BRCA1-207ENST00000461798 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 S4R3C0 116 aa6.88□□□□□ -1.31
BRCA1-207ENST00000461798 RBMY1BA6NDE4 496 aaKnown RBP6.87□□□□□ -1.31
BRCA1-207ENST00000461798 RBMY1EA6NEQ0 496 aaKnown RBP6.87□□□□□ -1.31
BRCA1-207ENST00000461798 OR11H12B2RN74 326 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 TGOLN2O43493 480 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 SNAPC5O75971 98 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 RBMY1DP0C7P1 496 aaKnown RBP6.87□□□□□ -1.31
BRCA1-207ENST00000461798 RPA2P15927 270 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 ELK1P19419 428 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 RCVRNP35243 200 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 RORCP51449 518 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 MFAP2P55001 183 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 VBP1P61758 197 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 GUCA2BQ16661 112 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 TM4SF20Q53R12 229 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF57Q68EA5 555 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-207ENST00000461798 PLET1Q6UQ28 207 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 UNQ9165/PRO28630Q6UXU0 137 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 SLC16A13Q7RTY0 426 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 TMEM61Q8N0U2 210 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 DEFB125Q8N687 156 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 CACNG8Q8WXS5 425 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 LSM10Q969L4 123 aaKnown RBP6.87□□□□□ -1.31
BRCA1-207ENST00000461798 WDR89Q96FK6 387 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-207ENST00000461798 TSC22D3Q99576 134 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 KRTAP4-2Q9BYR5 136 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 PLEKHA3Q9HB20 300 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms