RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ABCA4P78363 2273 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 MEX3AA1L020 520 aaKnown RBP11.5□□□□□ -0.57
ERCC3-205ENST00000460485 B4DEV8 164 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 SEC14L6B5MCN3 397 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 H0YJW9 148 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 C19orf84I3L1E1 186 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 LGALS7P47929 136 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 DTX2Q86UW9 622 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 TGIF2LYQ8IUE0 185 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 TGIF2LXQ8IUE1 241 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
ERCC3-205ENST00000460485 C15orf54Q8N8G6 183 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 BEND2Q8NDZ0 799 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 OR1L8Q8NGR8 309 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 NEUROG1Q92886 237 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 LEAP2Q969E1 77 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 FLYWCH2Q96CP2 140 aaKnown RBP11.5□□□□□ -0.57
ERCC3-205ENST00000460485 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 NPVFQ9HCQ7 196 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 VAX2Q9UIW0 290 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
ERCC3-205ENST00000460485 A0A1W2PPE3 182 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 PRSS46E5RG02 174 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 MMP23AO75900 390 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
ERCC3-205ENST00000460485 CCL3L1P16619 93 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 NPBWR1P48145 328 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 PSMB3P49720 205 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 ICAM4Q14773 271 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 VMA21Q3ZAQ7 101 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 FFAR4Q5NUL3 377 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 SLC35E3Q7Z769 313 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 LHX4Q969G2 390 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 ST6GALNAC6Q969X2 333 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
ERCC3-205ENST00000460485 MAP1AP78559 2803 aaPredicted RBP11.48□□□□□ -0.57
ERCC3-205ENST00000460485 A0A087WWC5 75 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 SMCO3A2RU48 225 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 FAM74A7A6NL05 159 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 C9JQL5 133 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 TMEM250H0YL14 139 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 SIAH2O43255 324 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 IFNA4P05014 189 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 FOSL1P15407 271 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 ERVFRD-1P60508 538 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 C2orf83Q53S99 150 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 C11orf71Q6IPW1 123 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 OR10G9Q8NGN4 311 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 OR10G7Q8NGN6 311 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 RNF5Q99942 180 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
ERCC3-205ENST00000460485 COMMD5Q9GZQ3 224 aa11.48□□□□□ -0.57
ERCC3-205ENST00000460485 ROS1P08922 2347 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 PLAUP00749 431 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 IGHV3-7P01780 117 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 LIPFP07098 398 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 SAA1P0DJI8 122 aaPredicted RBP11.47□□□□□ -0.57
ERCC3-205ENST00000460485 MAS1LP35410 378 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 CDC34P49427 236 aaPredicted RBP11.47□□□□□ -0.57
ERCC3-205ENST00000460485 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
ERCC3-205ENST00000460485 LINC00205P59089 165 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 RPL8P62917 257 aaKnown RBP11.47□□□□□ -0.57
ERCC3-205ENST00000460485 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
ERCC3-205ENST00000460485 BSXQ3C1V8 233 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 TEPPQ6URK8 271 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
ERCC3-205ENST00000460485 ABHD12Q8N2K0 398 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 FOXC2Q99958 501 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 C19orf24Q9BVV8 132 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 CLEC7AQ9BXN2 247 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 CHODLQ9H9P2 273 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 SIRT7Q9NRC8 400 aa11.47□□□□□ -0.57
ERCC3-205ENST00000460485 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 M0R036 132 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 M0R1W7 72 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 FCN3O75636 299 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 ATF4P18848 351 aaPredicted RBP11.46□□□□□ -0.57
ERCC3-205ENST00000460485 SUB1P53999 127 aaKnown RBP eCLIP11.46□□□□□ -0.57
ERCC3-205ENST00000460485 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
ERCC3-205ENST00000460485 ZNF726P1Q15940 193 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 SSX2Q16385 188 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 HAGHQ16775 308 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 ACSM6Q6P461 480 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 TREML4Q6UXN2 200 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 ZNF841Q6ZN19 808 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 VKORC1L1Q8N0U8 176 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
ERCC3-205ENST00000460485 NANPQ8TBE9 248 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 CACNG8Q8WXS5 425 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 TVP23CQ96ET8 276 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
ERCC3-205ENST00000460485 LSM4Q9Y4Z0 139 aaKnown RBP11.46□□□□□ -0.57
ERCC3-205ENST00000460485 ARL2-SNX15V9GYD0 113 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms