RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 CORTO00230 105 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 ATP6V0E1O15342 81 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 PITX3O75364 302 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 FAM209BQ5JX69 171 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 TEX38Q6PEX7 206 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 TMEM65Q6PI78 240 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 LURAP1LQ8IV03 231 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 OR4X2Q8NGF9 303 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 SLA2Q9H6Q3 261 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 U3KQ87 197 aa9.75□□□□□ -0.85
HDAC4-206ENST00000460235 A0A0G2JRQ6 117 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 PSMB11A5LHX3 300 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 NPIPB5A8MRT5 1133 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 L7N2F9 121 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 SYNGR2O43760 224 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 OR13C7P0DN81 318 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 HTR2BP41595 481 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 VAMP2P63027 116 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 ID3Q02535 119 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 ECSCRQ19T08 205 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 FBLN7Q53RD9 439 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 Q6ZRM9 215 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 TTC9CQ8N5M4 171 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 LFNGQ8NES3 379 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 DTD1Q8TEA8 209 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 RNF114Q9Y508 228 aa9.74□□□□□ -0.85
HDAC4-206ENST00000460235 A0A0G2JLM5 398 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 HMX3A6NHT5 357 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 BRI3O95415 125 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 SCGB1D2O95969 90 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 OPN1MWP04001 364 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 ELANEP08246 267 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 OPN1MW2P0DN77 364 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 OPN1MW3P0DN78 364 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 PSMB6P28072 239 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 TAS2R30P59541 319 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 RAP2BP61225 183 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 RAB11AP62491 216 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 RPL23AP62750 156 aaKnown RBP9.73□□□□□ -0.85
HDAC4-206ENST00000460235 IZUMO4Q1ZYL8 232 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 CXorf66Q5JRM2 361 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-206ENST00000460235 OR4D5Q8NGN0 318 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 LINC01006Q8NI28 216 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 FAM110DQ8TAY7 271 aaPredicted RBP9.73□□□□□ -0.85
HDAC4-206ENST00000460235 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 ZNF355PQ9NSJ1 428 aa9.73□□□□□ -0.85
HDAC4-206ENST00000460235 SH2D7A6NKC9 451 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-206ENST00000460235 CCSO14618 274 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 SCGB2A1O75556 95 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 IFNA10P01566 189 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 CRYGCP07315 174 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 GIPP09681 153 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-206ENST00000460235 SRSF4Q08170 494 aaKnown RBP9.72□□□□□ -0.85
HDAC4-206ENST00000460235 FOXE3Q13461 319 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 MRGPRG-AS1Q2M3A8 158 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 OR2C3Q8N628 320 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 OR1P1Q8NH06 330 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 THAP6Q8TBB0 222 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 ZNF436Q9C0F3 470 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-206ENST00000460235 SERTAD4Q9NUC0 356 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 WSB1Q9Y6I7 421 aa9.72□□□□□ -0.85
HDAC4-206ENST00000460235 TEP1Q99973 2627 aaKnown RBP9.72□□□□□ -0.85
HDAC4-206ENST00000460235 RPS10-NUDT3A0A1W2PQS6 291 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 IGLC7A0M8Q6 106 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 FAM223BA6NKX1 122 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 TEX22C9J3V5 150 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 IGHG4P01861 327 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 NUP62P37198 522 aaPredicted RBP9.71□□□□□ -0.86
HDAC4-206ENST00000460235 S100A10P60903 97 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 EXOSC2Q13868 293 aaKnown RBP9.71□□□□□ -0.86
HDAC4-206ENST00000460235 FCN2Q15485 313 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 C10orf55Q5SWW7 151 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 ETFRF1Q6IPR1 90 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 FAM223AQ8IWN6 122 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 KLHDC1Q8N7A1 406 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 ZNF114Q8NC26 417 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 OR5AU1Q8NGC0 362 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 USMG5Q96IX5 58 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 SMIM8Q96KF7 97 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 FAM103A1Q9BTL3 118 aaKnown RBP9.71□□□□□ -0.86
HDAC4-206ENST00000460235 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 RBKSQ9H477 322 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 GAR1Q9NY12 217 aaKnown RBP9.71□□□□□ -0.86
HDAC4-206ENST00000460235 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
HDAC4-206ENST00000460235 JMJD1CQ15652 2540 aa9.71□□□□□ -0.86
HDAC4-206ENST00000460235 MXRA5Q9NR99 2828 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 E5RGE8 158 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 TSC22D2O75157 780 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 FBXO24O75426 580 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 MBPP02686 304 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 PF4V1P10720 104 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 CTRB1P17538 263 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 NDPQ00604 133 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 CTRB2Q6GPI1 263 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 SLC25A24Q6NUK1 477 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms