RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 OR5B12Q96R08 314 aa9.97□□□□□ -0.81
COL18A1-206ENST00000459895 NUDT15Q9NV35 164 aa9.97□□□□□ -0.81
COL18A1-206ENST00000459895 PKD1L1Q8TDX9 2849 aa9.97□□□□□ -0.81
COL18A1-206ENST00000459895 TEX50A0A1B0GTY4 177 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ATG12O94817 140 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 SFT2D2O95562 160 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ANXA3P12429 323 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 SRPXP78539 464 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 WT1-ASQ06250 92 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 SPINK9Q5DT21 86 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ZNF491Q8N8L2 437 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 OR1L8Q8NGR8 309 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 OR5B3Q8NH48 314 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 OR4A16Q8NH70 328 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 LSM10Q969L4 123 aaKnown RBP9.96□□□□□ -0.82
COL18A1-206ENST00000459895 RRNAD1Q96FB5 475 aaKnown RBP9.96□□□□□ -0.82
COL18A1-206ENST00000459895 TMEM68Q96MH6 324 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 HINT2Q9BX68 163 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ALX4Q9H161 411 aaPredicted RBP9.96□□□□□ -0.82
COL18A1-206ENST00000459895 SLA2Q9H6Q3 261 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 NDUFA4L2Q9NRX3 87 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ZNF355PQ9NSJ1 428 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ZFP57Q9NU63 452 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 CACNG5Q9UF02 275 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 ZNF257Q9Y2Q1 563 aa9.96□□□□□ -0.82
COL18A1-206ENST00000459895 TRAV6A0A075B6T7 132 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 A0A0B4J293 547 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 ST8SIA3O43173 380 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 IGHV3-11P01762 117 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 TCRBP04435 133 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 LGALS1P09382 135 aaKnown RBP9.95□□□□□ -0.82
COL18A1-206ENST00000459895 CTRB1P17538 263 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 PSMB6P28072 239 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 CDX1P47902 265 aaPredicted RBP9.95□□□□□ -0.82
COL18A1-206ENST00000459895 UBE2MP61081 183 aaKnown RBP9.95□□□□□ -0.82
COL18A1-206ENST00000459895 PRCDQ00LT1 54 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 DHRS2Q13268 280 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 NMSQ5H8A3 153 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 CTRB2Q6GPI1 263 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 THOC7Q6I9Y2 204 aaKnown RBP9.95□□□□□ -0.82
COL18A1-206ENST00000459895 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 Q6ZRM9 215 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 FAM219AQ8IW50 185 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 TTC9CQ8N5M4 171 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 OR4F17Q8NGA8 305 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 OR52B4Q8NGK2 314 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 RAX2Q96IS3 184 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 UBE2E2Q96LR5 201 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 OR4F4Q96R69 305 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
COL18A1-206ENST00000459895 A0A0B4J2A0 478 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 C9orf170A2RU37 121 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 I3L521 148 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 NXPH3O95157 252 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 BRI3O95415 125 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 PF4P02776 101 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 CRYGCP07315 174 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 OR4E1P0C645 316 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 TRAPPC2P0DI81 140 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 TRAPPC2BP0DI82 140 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 MECP2P51608 486 aaKnown RBP9.94□□□□□ -0.82
COL18A1-206ENST00000459895 RHOGP84095 191 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 FHL3Q13643 280 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 C4orf46Q504U0 113 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 C11orf87Q6NUJ2 197 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 MZT2BQ6NZ67 158 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 LYZL2Q7Z4W2 148 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 LYG2Q86SG7 212 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 ZNF429Q86V71 674 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 LGI3Q8N145 548 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 ENKURQ8TC29 256 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 GPR146Q96CH1 333 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 SRSF8Q9BRL6 282 aaKnown RBP9.94□□□□□ -0.82
COL18A1-206ENST00000459895 SHPKQ9UHJ6 478 aa9.94□□□□□ -0.82
COL18A1-206ENST00000459895 IGLV11-55A0A075B6I3 123 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 TRBV9A0A0B4J1U6 114 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 FAM240BA0A1B0GVZ2 78 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 FAM223BA6NKX1 122 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 OR2J3O76001 311 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 OR13C7P0DN81 318 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 HOXA1P49639 335 aaPredicted RBP9.93□□□□□ -0.82
COL18A1-206ENST00000459895 EXOSC2Q13868 293 aaKnown RBP9.93□□□□□ -0.82
COL18A1-206ENST00000459895 AARDQ4LEZ3 155 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 FAM223AQ8IWN6 122 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 LINC00482Q8N8I6 264 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 LRTM2Q8N967 370 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 FANCD2OSQ96PS1 177 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 PLEKHA3Q9HB20 300 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 FKBP11Q9NYL4 201 aa9.93□□□□□ -0.82
COL18A1-206ENST00000459895 IGHV4OR15-8A0A075B7B6 117 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 A0A087WW49 117 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 DUXBA0A1W2PPF3 345 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 MFAP2P55001 183 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 RAB25P57735 213 aa9.92□□□□□ -0.82
COL18A1-206ENST00000459895 HSPE1P61604 102 aaKnown RBP9.92□□□□□ -0.82
COL18A1-206ENST00000459895 RUNX1Q01196 453 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms