RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KIR2DL5BQ8NHK3 375 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 GIMAP1Q8WWP7 306 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 DAZ1Q9NQZ3 744 aaKnown RBP16.03■□□□□ 0.16
CPNE1-220ENST00000458038 COMMD9Q9P000 198 aa16.03■□□□□ 0.16
CPNE1-220ENST00000458038 GVQW1Q8N7I0 195 aa16.02■□□□□ 0.16
CPNE1-220ENST00000458038 GDPD1Q8N9F7 314 aa16.02■□□□□ 0.16
CPNE1-220ENST00000458038 TMEM190Q8WZ59 177 aa16.02■□□□□ 0.16
CPNE1-220ENST00000458038 BSCL2Q96G97 398 aaPredicted RBP16.02■□□□□ 0.16
CPNE1-220ENST00000458038 DIABLOQ9NR28 239 aa16.02■□□□□ 0.16
CPNE1-220ENST00000458038 TMEM140Q9NV12 185 aa16.02■□□□□ 0.16
CPNE1-220ENST00000458038 TMEM127O75204 238 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 LY6G6CO95867 125 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 SERPINE2P07093 398 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 TRAPPC2P0DI81 140 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 TRAPPC2BP0DI82 140 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 SDC2P34741 201 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 SPARTQ8N0X7 666 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 CADM3Q8N126 398 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 OR5AP2Q8NGF4 316 aa16.01■□□□□ 0.15
CPNE1-220ENST00000458038 TRAV3A0A0B4J244 114 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 IGHV3-35A0A0C4DH35 117 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 A0A0J9YWU9 116 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 NDUFA4O00483 81 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 ERVK-16P61578 105 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 ZNF773Q6PK81 442 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 CEMP1Q6PRD7 247 aaPredicted RBP16■□□□□ 0.15
CPNE1-220ENST00000458038 LYG2Q86SG7 212 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 TMEM217Q8N7C4 229 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 STPG3Q8N7X2 389 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 OR1L8Q8NGR8 309 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 SLC25A38Q96DW6 304 aa16■□□□□ 0.15
CPNE1-220ENST00000458038 YTHDF1Q9BYJ9 559 aaKnown RBP16■□□□□ 0.15
CPNE1-220ENST00000458038 KLK5Q9Y337 293 aaPredicted RBP16■□□□□ 0.15
CPNE1-220ENST00000458038 OR4C46A6NHA9 309 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 K7EMT4 169 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 OR13C7P0DN81 318 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 FXYD4P59646 89 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 AADACL3Q5VUY0 350 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 SLC25A24Q6NUK1 477 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 ZNF818PQ6ZRF7 136 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 OR10W1Q8NGF6 305 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 OR51H1Q8NH63 302 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 RNF183Q96D59 192 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 AUNIPQ9H7T9 357 aa15.99■□□□□ 0.15
CPNE1-220ENST00000458038 OR2T8A6NH00 312 aa15.98■□□□□ 0.15
CPNE1-220ENST00000458038 PTHLHP12272 177 aa15.98■□□□□ 0.15
CPNE1-220ENST00000458038 HERV-K104P61576 105 aa15.98■□□□□ 0.15
CPNE1-220ENST00000458038 PMS2P11Q13670 270 aa15.98■□□□□ 0.15
CPNE1-220ENST00000458038 TEX50A0A1B0GTY4 177 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 S1PR2O95136 353 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 F2RP25116 425 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 CMC4P56277 68 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-220ENST00000458038 MXD1Q05195 221 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 WT1-ASQ06250 92 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 DEFB135Q30KP9 77 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 IDNKQ5T6J7 187 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 TMEM17Q86X19 198 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 OR5H6Q8NGV6 325 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 GALNT14Q96FL9 552 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 C6orf62Q9GZU0 229 aaPredicted RBP15.97■□□□□ 0.15
CPNE1-220ENST00000458038 NDUFA4L2Q9NRX3 87 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 C21orf62Q9NYP8 219 aa15.97■□□□□ 0.15
CPNE1-220ENST00000458038 F11RQ9Y624 299 aaKnown RBP15.97■□□□□ 0.15
CPNE1-220ENST00000458038 MARCH11A6NNE9 402 aa15.96■□□□□ 0.15
CPNE1-220ENST00000458038 GNRHRP30968 328 aa15.96■□□□□ 0.15
CPNE1-220ENST00000458038 DHRS11Q6UWP2 260 aa15.96■□□□□ 0.15
CPNE1-220ENST00000458038 LSM10Q969L4 123 aaKnown RBP15.96■□□□□ 0.15
CPNE1-220ENST00000458038 UBQLN2Q9UHD9 624 aa15.96■□□□□ 0.15
CPNE1-220ENST00000458038 C15orf62A8K5M9 175 aa15.95■□□□□ 0.14
CPNE1-220ENST00000458038 SNAPC5O75971 98 aa15.95■□□□□ 0.14
CPNE1-220ENST00000458038 ODF3L2Q3SX64 289 aa15.95■□□□□ 0.14
CPNE1-220ENST00000458038 Q9H521 79 aa15.95■□□□□ 0.14
CPNE1-220ENST00000458038 IFT46Q9NQC8 304 aa15.95■□□□□ 0.14
CPNE1-220ENST00000458038 FKBP11Q9NYL4 201 aa15.95■□□□□ 0.14
CPNE1-220ENST00000458038 RPA2P15927 270 aa15.94■□□□□ 0.14
CPNE1-220ENST00000458038 CMTM1Q8IZ96 169 aa15.94■□□□□ 0.14
CPNE1-220ENST00000458038 SCARB1Q8WTV0 552 aa15.94■□□□□ 0.14
CPNE1-220ENST00000458038 TMEM56Q96MV1 263 aa15.94■□□□□ 0.14
CPNE1-220ENST00000458038 C20orf24Q9BUV8 137 aa15.94■□□□□ 0.14
CPNE1-220ENST00000458038 XRCC3O43542 346 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 CLEC2LP0C7M8 214 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 EWSR1Q01844 656 aaKnown RBP eCLIP15.93■□□□□ 0.14
CPNE1-220ENST00000458038 RELQ04864 619 aaPredicted RBP15.93■□□□□ 0.14
CPNE1-220ENST00000458038 CROCCP3Q8IVE0 287 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 OR5B3Q8NH48 314 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 DGCR14Q96DF8 476 aaKnown RBP15.93■□□□□ 0.14
CPNE1-220ENST00000458038 S100A16Q96FQ6 103 aaKnown RBP15.93■□□□□ 0.14
CPNE1-220ENST00000458038 CHRDL1Q9BU40 450 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 HINT2Q9BX68 163 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 MAP6D1Q9H9H5 199 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 EHFQ9NZC4 300 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 PRNDQ9UKY0 176 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 OR51B2Q9Y5P1 312 aa15.93■□□□□ 0.14
CPNE1-220ENST00000458038 PGLYRP1O75594 196 aaPredicted RBP15.92■□□□□ 0.14
CPNE1-220ENST00000458038 TSPAN14Q8NG11 270 aa15.92■□□□□ 0.14
CPNE1-220ENST00000458038 MOB3AQ96BX8 217 aa15.92■□□□□ 0.14
CPNE1-220ENST00000458038 TSC22D3Q99576 134 aa15.92■□□□□ 0.14
CPNE1-220ENST00000458038 SMPXQ9UHP9 88 aa15.92■□□□□ 0.14
CPNE1-220ENST00000458038 LOC100506127A0A0U1RQW1 187 aa15.91■□□□□ 0.14
CPNE1-220ENST00000458038 KRASP01116 189 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms