RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 NMSQ5H8A3 153 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 TEX38Q6PEX7 206 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 RRNAD1Q96FB5 475 aaKnown RBP10.95□□□□□ -0.66
TIMP1-205ENST00000456754 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 OR5B12Q96R08 314 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 GNB4Q9HAV0 340 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 NDUFA4L2Q9NRX3 87 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 ZNF355PQ9NSJ1 428 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 COA4Q9NYJ1 87 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 PRNDQ9UKY0 176 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 DMRT1Q9Y5R6 373 aa10.95□□□□□ -0.66
TIMP1-205ENST00000456754 TRRAPQ9Y4A5 3859 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 A0A0B4J2A0 478 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 TRAPPC2P0DI81 140 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 TRAPPC2BP0DI82 140 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 RAB9AP51151 201 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 DEFA1P59665 94 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 DEFA3P59666 94 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 RPL23AP62750 156 aaKnown RBP10.94□□□□□ -0.66
TIMP1-205ENST00000456754 TMEM267Q0VDI3 215 aaPredicted RBP10.94□□□□□ -0.66
TIMP1-205ENST00000456754 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 CADM3Q8N126 398 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 DUSP18Q8NEJ0 188 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 OR1L8Q8NGR8 309 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 FAM110DQ8TAY7 271 aaPredicted RBP10.94□□□□□ -0.66
TIMP1-205ENST00000456754 IL22RA2Q969J5 263 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 SPIN2AQ99865 258 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 SPIN2BQ9BPZ2 258 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 ALX4Q9H161 411 aaPredicted RBP10.94□□□□□ -0.66
TIMP1-205ENST00000456754 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
TIMP1-205ENST00000456754 CCSO14618 274 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 ELANEP08246 267 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 OR13C7P0DN81 318 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 MECP2P51608 486 aaKnown RBP10.93□□□□□ -0.66
TIMP1-205ENST00000456754 MFAP2P55001 183 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 TPPP2P59282 170 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 CXorf66Q5JRM2 361 aaPredicted RBP10.93□□□□□ -0.66
TIMP1-205ENST00000456754 GGNBP1Q5YKI7 109 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 TTC9CQ8N5M4 171 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 LRTM2Q8N967 370 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 LSM10Q969L4 123 aaKnown RBP10.93□□□□□ -0.66
TIMP1-205ENST00000456754 GON7Q9BXV9 100 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 S4R3C0 116 aa10.93□□□□□ -0.66
TIMP1-205ENST00000456754 ATG12O94817 140 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 DUS4LO95620 317 aaKnown RBP10.92□□□□□ -0.66
TIMP1-205ENST00000456754 TRGV3P03979 118 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 CTRB1P17538 263 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 PSMB6P28072 239 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
TIMP1-205ENST00000456754 SRPXP78539 464 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 PRCDQ00LT1 54 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 C2orf68Q2NKX9 166 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 CTRB2Q6GPI1 263 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 ZNF491Q8N8L2 437 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 KLHL30-AS1Q8NEE0 82 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 FANCD2OSQ96PS1 177 aa10.92□□□□□ -0.66
TIMP1-205ENST00000456754 TSSC4Q9Y5U2 329 aaPredicted RBP10.92□□□□□ -0.66
TIMP1-205ENST00000456754 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 INMT-MINDY4F8WBC2 141 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 OR2J3O76001 311 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 IFNA17P01571 189 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 CRYGCP07315 174 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 TMEM65Q6PI78 240 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 PLET1Q6UQ28 207 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 ZNF429Q86V71 674 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 NDUFA11Q86Y39 141 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 COMMD1Q8N668 190 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 UXS1Q8NBZ7 420 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 OR5B3Q8NH48 314 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 ZNF431Q8TF32 576 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-205ENST00000456754 MITD1Q8WV92 249 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 MARVELD1Q9BSK0 173 aa10.91□□□□□ -0.66
TIMP1-205ENST00000456754 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.91□□□□□ -0.66
TIMP1-205ENST00000456754 IGHV3-21A0A0B4J1V1 117 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 NUDT19A8MXV4 375 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 PITX3O75364 302 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 NDUFB8O95169 186 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 IGHV3-23P01764 117 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 FGF2P09038 288 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 SULT1A3P0DMM9 295 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 SULT1A4P0DMN0 295 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 RHOGP84095 191 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 DCTN2Q13561 401 aaKnown RBP10.9□□□□□ -0.66
TIMP1-205ENST00000456754 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 ETV3LQ6ZN32 361 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 COQ8AQ8NI60 647 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 OR10C1Q96KK4 312 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 TMEM68Q96MH6 324 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 FKBP11Q9NYL4 201 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 ZNF257Q9Y2Q1 563 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 VWFP04275 2813 aa10.9□□□□□ -0.66
TIMP1-205ENST00000456754 TRBV12-3P01733 135 aa10.89□□□□□ -0.67
TIMP1-205ENST00000456754 IL5P05113 134 aa10.89□□□□□ -0.67
TIMP1-205ENST00000456754 HOXA1P49639 335 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms