RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 HSMCR30P0CW71 290 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 SLC25A24Q6NUK1 477 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 GDPD1Q8N9F7 314 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 Q8NAQ8 132 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 OR10W1Q8NGF6 305 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 AIFM2Q9BRQ8 373 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 QTRT1Q9BXR0 403 aaKnown RBP16.91■□□□□ 0.3
PTPRA-208ENST00000455631 C21orf62Q9NYP8 219 aa16.91■□□□□ 0.3
PTPRA-208ENST00000455631 IGHV3-49A0A0A0MS15 119 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 TRAV10A0A0B4J240 114 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 TRAV3A0A0B4J244 114 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 HLA-DMBP28068 263 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 TRAM1Q15629 374 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 Q6ZTC4 211 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 GBGT1Q8N5D6 347 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 PACRGLQ8N7B6 248 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 RHPN1-AS1Q9BWJ2 59 aa16.9■□□□□ 0.3
PTPRA-208ENST00000455631 IGHV7-4-1A0A0J9YVY3 117 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 METTL21EPA6NDL7 271 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 M0R2N4 97 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 CHEK1O14757 476 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 RAB6AP20340 208 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 PSMA1P25786 263 aaKnown RBP16.89■□□□□ 0.29
PTPRA-208ENST00000455631 Q56UQ5 140 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 SPAG16Q8N0X2 631 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 TMEM116Q8NCL8 245 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 CMTM3Q96MX0 182 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 C8orf4Q9NR00 106 aa16.89■□□□□ 0.29
PTPRA-208ENST00000455631 DNAH11Q96DT5 4516 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 C15orf61A6NNL5 157 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 F8W735 103 aaPredicted RBP16.88■□□□□ 0.29
PTPRA-208ENST00000455631 UPK2O00526 184 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 OR13C7P0DN81 318 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 OR10A3P58181 314 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 FABP5Q01469 135 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 PVRIGQ6DKI7 326 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 CNIH2Q6PI25 160 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 CENPSQ8N2Z9 138 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 SCARB1Q8WTV0 552 aa16.88■□□□□ 0.29
PTPRA-208ENST00000455631 IGHV4-28A0A0C4DH34 117 aa16.87■□□□□ 0.29
PTPRA-208ENST00000455631 RBMY1A1P0DJD3 496 aaKnown RBP16.87■□□□□ 0.29
PTPRA-208ENST00000455631 RBMY1CP0DJD4 496 aa16.87■□□□□ 0.29
PTPRA-208ENST00000455631 ARL6IP1Q15041 203 aa16.87■□□□□ 0.29
PTPRA-208ENST00000455631 RBMY1FQ15415 496 aaKnown RBP16.87■□□□□ 0.29
PTPRA-208ENST00000455631 ATG5Q9H1Y0 275 aa16.87■□□□□ 0.29
PTPRA-208ENST00000455631 DNAH17Q9UFH2 4485 aa16.87■□□□□ 0.29
PTPRA-208ENST00000455631 SERPINE2P07093 398 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 TAS2R31P59538 309 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 WT1-ASQ06250 92 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 LEMD1Q68G75 181 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 POM121L12Q8N7R1 296 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 NUDCD2Q8WVJ2 157 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 SECTM1Q8WVN6 248 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 ATP6V0BQ99437 205 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 RNF126Q9BV68 326 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 TMEM140Q9NV12 185 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 PLA2G2EQ9NZK7 142 aa16.86■□□□□ 0.29
PTPRA-208ENST00000455631 IGHV3OR16-13A0A075B7E8 117 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 IGHV3-74A0A0B4J1X5 117 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 IFITM5A6NNB3 132 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 SULT1C2O00338 296 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 YIF1AO95070 293 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 NQO2P16083 231 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 CDNFQ49AH0 187 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 THOC7Q6I9Y2 204 aaKnown RBP16.85■□□□□ 0.29
PTPRA-208ENST00000455631 ZNF575Q86XF7 245 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 DMBX1Q8NFW5 382 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 DCSTAMPQ9H295 470 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 CCL28Q9NRJ3 127 aa16.85■□□□□ 0.29
PTPRA-208ENST00000455631 PDCD5O14737 125 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 RBFOX2O43251 390 aaKnown RBP eCLIP16.84■□□□□ 0.293e-8■■■■■ 34.2
PTPRA-208ENST00000455631 TRAPPC2P0DI81 140 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 TRAPPC2BP0DI82 140 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 P0DMU3 169 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 FAM231AP0DMU4 169 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 FAM231CP0DMU5 169 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 PAFAH1B2P68402 229 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 RELQ04864 619 aaPredicted RBP16.84■□□□□ 0.29
PTPRA-208ENST00000455631 HACD4Q5VWC8 232 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 HSD17B13Q7Z5P4 300 aaPredicted RBP16.84■□□□□ 0.29
PTPRA-208ENST00000455631 ANXA10Q9UJ72 324 aa16.84■□□□□ 0.29
PTPRA-208ENST00000455631 F11RQ9Y624 299 aaKnown RBP16.84■□□□□ 0.29
PTPRA-208ENST00000455631 K7EIM0 57 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 HPRT1P00492 218 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 AMBPP02760 352 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 MIFP14174 115 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 DEFB131AP59861 70 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 POU2AF1Q16633 256 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 FAM90A2PQ658T7 463 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 HINT2Q9BX68 163 aa16.83■□□□□ 0.28
PTPRA-208ENST00000455631 TMEM235A6NFC5 223 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 NUPL2O15504 423 aaKnown RBP16.82■□□□□ 0.28
PTPRA-208ENST00000455631 CTSGP08311 255 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 MLLT11Q13015 90 aaPredicted RBP16.82■□□□□ 0.28
PTPRA-208ENST00000455631 CATR1Q13166 79 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 TCF24Q7RTU0 167 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 STHQ8IWL8 128 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 OR13F1Q8NGS4 319 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 ZNF414Q96IQ9 312 aa16.82■□□□□ 0.28
PTPRA-208ENST00000455631 OR10C1Q96KK4 312 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms