RNA–Protein interactions for RNA: ENST00000453724.5

RPE-215, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5

Gene RPE, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-215	ENST00000453724	TAF15	Q92804	592 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM230	Q96A57	120 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	USMG5	Q96IX5	58 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	ST6GAL2	Q96JF0	529 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	UBE2E2	Q96LR5	201 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM56	Q96MV1	263 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	CLCC1	Q96S66	551 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	PDCD10	Q9BUL8	212 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	ALX4	Q9H161	411 aa	Predicted RBP	4.87	□□□□□ -1.63
RPE-215	ENST00000453724	C20orf85	Q9H1P6	137 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	COA4	Q9NYJ1	87 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	SHPK	Q9UHJ6	478 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM56-RWDD3	S4R434	201 aa		4.87	□□□□□ -1.63
RPE-215	ENST00000453724	FAM240B	A0A1B0GVZ2	78 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	MSGN1	A6NI15	193 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	LINC01548	A6NM66	108 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	INS-IGF2	F8WCM5	200 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724		G3V318	75 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	RBMXL2	O75526	392 aa	Known RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	IGKV1-39	P01597	117 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	HLA-A	P01891	365 aa	Known RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	IGKV1D-39	P04432	117 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	CD28	P10747	220 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	EGR2	P11161	476 aa	Predicted RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	SLC25A6	P12236	298 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	AKR1C4	P17516	323 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	VAMP1	P23763	118 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	BTC	P35070	178 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	MECP2	P51608	486 aa	Known RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	CCR6	P51684	374 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	TPPP2	P59282	170 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	OR2B8P	P59922	312 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	KRTAP10-3	P60369	221 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	SUPT4H1	P63272	117 aa	Known RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM187	Q14656	261 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	KLK9	Q2XQG4	91 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	AARD	Q4LEZ3	155 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	TMEM268	Q5VZI3	342 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	NOXA1	Q86UR1	476 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	SLC7A5P1	Q8MH63	180 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	TTC9C	Q8N5M4	171 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF114	Q8NC26	417 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	ADAD2	Q8NCV1	583 aa	Known RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	DUSP18	Q8NEJ0	188 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	OR52E5	Q8NH55	327 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	COQ8A	Q8NI60	647 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	ATP6V0B	Q99437	205 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	CITED2	Q99967	270 aa	Predicted RBP	4.86	□□□□□ -1.63
RPE-215	ENST00000453724	THYN1	Q9P016	225 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	LINC00527	Q9UJ94	153 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	KLK9	Q9UKQ9	250 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	FBXO7	Q9Y3I1	522 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	TMED3	Q9Y3Q3	217 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	OR51B2	Q9Y5P1	312 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	WSB1	Q9Y6I7	421 aa		4.86	□□□□□ -1.63
RPE-215	ENST00000453724	TRBV9	A0A0B4J1U6	114 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724		A0A1B0GU03	582 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	C13orf42	A0A1B0GVH6	325 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	IGLC7	A0M8Q6	106 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	NUDT19	A8MXV4	375 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	TEX22	C9J3V5	150 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	FAM90A26	D6RGX4	464 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PLA2G10	O15496	165 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SOX15	O60248	233 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PRAF2	O60831	178 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SFT2D2	O95562	160 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	DUS4L	O95620	317 aa	Known RBP	4.85	□□□□□ -1.63
RPE-215	ENST00000453724	LY86	O95711	162 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	IGKV1-5	P01602	117 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PF4	P02776	101 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	TRGV3	P03979	118 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	TCRB	P04435	133 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	CRYGC	P07315	174 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	OR4E1	P0C645	316 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SULT1A3	P0DMM9	295 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SULT1A4	P0DMN0	295 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	DEFA4	P12838	97 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	CTRB1	P17538	263 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PSMB6	P28072	239 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	RAB9A	P51151	201 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	HSPE1	P61604	102 aa	Known RBP	4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PRCD	Q00LT1	54 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PPP1R1A	Q13522	171 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SMCO1	Q147U7	214 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SP6	Q3SY56	376 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	C4orf46	Q504U0	113 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	NMS	Q5H8A3	153 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	TCTEX1D4	Q5JR98	221 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	CTRB2	Q6GPI1	263 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	LYG2	Q86SG7	212 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SELENOH	Q8IZQ5	122 aa	Known RBP	4.85	□□□□□ -1.63
RPE-215	ENST00000453724	TCTE3	Q8IZS6	198 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	SLC35G3	Q8N808	338 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	ZNF491	Q8N8L2	437 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	NECAP1	Q8NC96	275 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	KLHL30-AS1	Q8NEE0	82 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	FYTTD1	Q96QD9	318 aa	Known RBP	4.85	□□□□□ -1.63
RPE-215	ENST00000453724	FAM103A1	Q9BTL3	118 aa	Known RBP	4.85	□□□□□ -1.63
RPE-215	ENST00000453724	GPR61	Q9BZJ8	451 aa		4.85	□□□□□ -1.63
RPE-215	ENST00000453724	PLEKHA3	Q9HB20	300 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms