RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 RBMY1A1P0DJD3 496 aaKnown RBP15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 RBMY1CP0DJD4 496 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 GADD45AP24522 165 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 HLA-DMBP28068 263 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 TALDO1P37837 337 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 RBMY1FQ15415 496 aaKnown RBP15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 ZNF575Q86XF7 245 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 OR10W1Q8NGF6 305 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 DUSP21Q9H596 190 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 V9GY05 133 aa15.78■□□□□ 0.12
TNFRSF25-208ENST00000453341 IGKV3-7A0A075B6H7 116 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 M0R2N4 97 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 CHEK1O14757 476 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 CALRP27797 417 aaKnown RBP15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 SSX1Q16384 188 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 SPSB3Q6PJ21 355 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 UFD1Q92890 307 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 CNBD2Q96M20 576 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 HRASLSQ9HDD0 168 aa15.77■□□□□ 0.12
TNFRSF25-208ENST00000453341 AGRNO00468 2067 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 HERC1Q15751 4861 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 IGHV3-49A0A0A0MS15 119 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 TRAV10A0A0B4J240 114 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 IGHV4-28A0A0C4DH34 117 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 C15orf62A8K5M9 175 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 ATP6V1G2O95670 118 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 DTYMKP23919 212 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 CMC4P56277 68 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 GDPD1Q8N9F7 314 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 RHPN1-AS1Q9BWJ2 59 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 CCDC90BQ9GZT6 254 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 PLA2G2EQ9NZK7 142 aa15.76■□□□□ 0.11
TNFRSF25-208ENST00000453341 LRP1BQ9NZR2 4599 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 IGHV7-4-1A0A0J9YVY3 117 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 C15orf61A6NNL5 157 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 RGS10O43665 173 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 MRPS14O60783 128 aaKnown RBP15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 ARL6IP5O75915 188 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 HSMCR30P0CW71 290 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 PVRIGQ6DKI7 326 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 ZNF66Q6ZN08 573 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 NR2C2APQ86WQ0 139 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 GBGT1Q8N5D6 347 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 POM121L12Q8N7R1 296 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 SRSF8Q9BRL6 282 aaKnown RBP15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 C21orf62Q9NYP8 219 aa15.75■□□□□ 0.11
TNFRSF25-208ENST00000453341 UPK2O00526 184 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 TNFSF12O43508 249 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 CTXN2P0C2S0 81 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 WT1-ASQ06250 92 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 FAM90A2PQ658T7 463 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 SLC25A24Q6NUK1 477 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 SCARB1Q8WTV0 552 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 RNF126Q9BV68 326 aa15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 QTRT1Q9BXR0 403 aaKnown RBP15.74■□□□□ 0.11
TNFRSF25-208ENST00000453341 GIG44P09565 113 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF25-208ENST00000453341 HSPA13P48723 471 aa15.73■□□□□ 0.11
TNFRSF25-208ENST00000453341 TMEM116Q8NCL8 245 aa15.73■□□□□ 0.11
TNFRSF25-208ENST00000453341 ATP6V0BQ99437 205 aa15.73■□□□□ 0.11
TNFRSF25-208ENST00000453341 COMMD5Q9GZQ3 224 aa15.73■□□□□ 0.11
TNFRSF25-208ENST00000453341 ELOA3CA0A087WX78 387 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 K7EIM0 57 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 SERPINE2P07093 398 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 OR13C7P0DN81 318 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 RAB6AP20340 208 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 OR10A3P58181 314 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 FABP5Q01469 135 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 LEMD1Q68G75 181 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 SPAG16Q8N0X2 631 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 UBAC2Q8NBM4 344 aa15.72■□□□□ 0.11
TNFRSF25-208ENST00000453341 IGHV3OR16-13A0A075B7E8 117 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 IGHV3-74A0A0B4J1X5 117 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 AMBPP02760 352 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 CTSGP08311 255 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 RANBP1P43487 201 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 POU2AF1Q16633 256 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 CNIH2Q6PI25 160 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 ZNF773Q6PK81 442 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 PRSS48Q7RTY5 328 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 RAB26Q9ULW5 256 aa15.71■□□□□ 0.11
TNFRSF25-208ENST00000453341 CYB5BO43169 146 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 TAS2R31P59538 309 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 LGALS9BQ3B8N2 356 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 CDNFQ49AH0 187 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 Q56UQ5 140 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 NUDCD2Q8WVJ2 157 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 OR10C1Q96KK4 312 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 AIFM2Q9BRQ8 373 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 SCRT1Q9BWW7 348 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 CCL28Q9NRJ3 127 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 TMEM140Q9NV12 185 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 F11RQ9Y624 299 aaKnown RBP15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 X6R8D5 127 aa15.7■□□□□ 0.1
TNFRSF25-208ENST00000453341 RBFOX2O43251 390 aaKnown RBP eCLIP15.69■□□□□ 0.1
TNFRSF25-208ENST00000453341 P0DMU3 169 aa15.69■□□□□ 0.1
TNFRSF25-208ENST00000453341 FAM231AP0DMU4 169 aa15.69■□□□□ 0.1
TNFRSF25-208ENST00000453341 FAM231CP0DMU5 169 aa15.69■□□□□ 0.1
TNFRSF25-208ENST00000453341 MIFP14174 115 aa15.69■□□□□ 0.1
TNFRSF25-208ENST00000453341 DEFB131AP59861 70 aa15.69■□□□□ 0.1
TNFRSF25-208ENST00000453341 MLLT11Q13015 90 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms