RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 HPGDSO60760 199 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 GABARAPO95166 117 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 KRASP01116 189 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 CD7P09564 240 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 CBLN1P23435 193 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 LPAR6P43657 344 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 CD81P60033 236 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 ERVK-16P61578 105 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 CTF1Q16619 201 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 CASC10Q5T4H9 136 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.9
CPSF4-208ENST00000452047 SNX29P2Q8IUI4 249 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 NAA50Q9GZZ1 169 aaKnown RBP9.4□□□□□ -0.9
CPSF4-208ENST00000452047 EDA2RQ9HAV5 297 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 NDUFA4L2Q9NRX3 87 aa9.4□□□□□ -0.9
CPSF4-208ENST00000452047 TECRQ9NZ01 308 aaKnown RBP9.4□□□□□ -0.9
CPSF4-208ENST00000452047 DYNC2H1Q8NCM8 4307 aaKnown RBP9.4□□□□□ -0.9
CPSF4-208ENST00000452047 CLEC3BP05452 202 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 SERPINE2P07093 398 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 TRAPPC2P0DI81 140 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 TRAPPC2BP0DI82 140 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 OR13C7P0DN81 318 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 PTBP1P26599 531 aaKnown RBP eCLIP9.39□□□□□ -0.91
CPSF4-208ENST00000452047 GPR183P32249 361 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 RCVRNP35243 200 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 G6PCP35575 357 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 RORCP51449 518 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 MFAP2P55001 183 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 FAM106AQ4KMX7 169 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 PHLDA2Q53GA4 152 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 UNQ9165/PRO28630Q6UXU0 137 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 HSD17B13Q7Z5P4 300 aaPredicted RBP9.39□□□□□ -0.91
CPSF4-208ENST00000452047 OR1L8Q8NGR8 309 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 WDR89Q96FK6 387 aaPredicted RBP9.39□□□□□ -0.91
CPSF4-208ENST00000452047 NEURL2Q9BR09 285 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 SPATA25Q9BR10 227 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 WFDC10AQ9H1F0 79 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 TUBA4BQ9H853 241 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 FAM212BQ9NTI7 297 aaPredicted RBP9.39□□□□□ -0.91
CPSF4-208ENST00000452047 SLC2A8Q9NY64 477 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 THYN1Q9P016 225 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 MLXQ9UH92 298 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 NSG2Q9Y328 171 aa9.39□□□□□ -0.91
CPSF4-208ENST00000452047 ZNF320A2RRD8 509 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 DBX1A6NMT0 343 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 TPPPO94811 219 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 UCP3P55916 312 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 TSPAN5P62079 268 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 LPCAT3Q6P1A2 487 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 VN1R17PQ8TDU5 208 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 LSM10Q969L4 123 aaKnown RBP9.38□□□□□ -0.91
CPSF4-208ENST00000452047 RBM38Q9H0Z9 239 aaKnown RBP9.38□□□□□ -0.91
CPSF4-208ENST00000452047 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 OR51B2Q9Y5P1 312 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
CPSF4-208ENST00000452047 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
CPSF4-208ENST00000452047 C15orf61A6NNL5 157 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 ZNF701M0R085 212 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-208ENST00000452047 CYB5BO43169 146 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 TGOLN2O43493 480 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 IGKV1-39P01597 117 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 IGKV1D-39P04432 117 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 ALDH3B2P48448 385 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 GUCA2BQ16661 112 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 ZNF57Q68EA5 555 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-208ENST00000452047 TBC1D26Q86UD7 250 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 SLC38A6Q8IZM9 456 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 UXS1Q8NBZ7 420 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 OR5B3Q8NH48 314 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 SEC22AQ96IW7 307 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 ZNF436Q9C0F3 470 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-208ENST00000452047 PRNDQ9UKY0 176 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 CEPT1Q9Y6K0 416 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 SACSQ9NZJ4 4579 aa9.37□□□□□ -0.91
CPSF4-208ENST00000452047 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
CPSF4-208ENST00000452047 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
CPSF4-208ENST00000452047 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 F8W735 103 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-208ENST00000452047 M0QYG6 137 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 SNAPC5O75971 98 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 RBMY1DP0C7P1 496 aaKnown RBP9.36□□□□□ -0.91
CPSF4-208ENST00000452047 LYL1P12980 280 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 ZNF182P17025 639 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-208ENST00000452047 S100GP29377 79 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 SLC25A24Q6NUK1 477 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 MZT2AQ6P582 158 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 PLET1Q6UQ28 207 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 BTNL8Q6UX41 500 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 LHFPL1Q86WI0 220 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 TMEM190Q8WZ59 177 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 AP3S1Q92572 193 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 MARC2Q969Z3 335 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 ISOC1Q96CN7 298 aa9.36□□□□□ -0.91
CPSF4-208ENST00000452047 ATP6V0BQ99437 205 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms