RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 AP2S1P53680 142 aaPredicted RBP13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 VMA21Q3ZAQ7 101 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 SLC35E3Q7Z769 313 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 Q8N6K4 173 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 RNASE11Q8TAA1 199 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 RBPMSQ93062 196 aaKnown RBP13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 C2orf50Q96LR7 162 aa13.42□□□□□ -0.26
PRPF40A-204ENST00000450303 DUXBA0A1W2PPF3 345 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 LINC00862A6NCI5 91 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 S1PR2O95136 353 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 SPDEFO95238 335 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 IGKV1-16P04430 117 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 IGLL1P15814 213 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 BRWD1-AS2P59051 145 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 LRRC37A5PQ49AS3 106 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 KPRPQ5T749 579 aaPredicted RBP13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 ACOT7LQ6ZUV0 252 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 KCNRGQ8N5I3 272 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 DMBX1Q8NFW5 382 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 VSTM2AQ8TAG5 236 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 SCARB1Q8WTV0 552 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 RRNAD1Q96FB5 475 aaKnown RBP13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 TMEM56Q96MV1 263 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 TNFSF18Q9UNG2 199 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 TMEM56-RWDD3S4R434 201 aa13.41□□□□□ -0.26
PRPF40A-204ENST00000450303 ANKRD34BA5PLL1 514 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 IGHG2P01859 326 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 PF4P02776 101 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 AKR1C2P52895 323 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 MMDQ15546 238 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 TMEM268Q5VZI3 342 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 C18orf65Q6ZTR6 163 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 SELENOHQ8IZQ5 122 aaKnown RBP13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 LRTM2Q8N967 370 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 Q8N9W7 124 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 ZFP57Q9NU63 452 aa13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 PRKDCP78527 4128 aaKnown RBP13.4□□□□□ -0.26
PRPF40A-204ENST00000450303 NBR2O15453 112 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 BCL2L11O43521 198 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 KRASP01116 189 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 F2RL1P55085 397 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 PLGLAQ15195 96 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 POU2AF1Q16633 256 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 FAM219AQ8IW50 185 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 TEX45Q8NA69 505 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 NPBQ8NG41 125 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 RHOVQ96L33 236 aa13.39□□□□□ -0.27
PRPF40A-204ENST00000450303 MARCH11A6NNE9 402 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 RRHO14718 337 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 RLN2P04090 185 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 G6PCP35575 357 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 UBE2KP61086 200 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 SSX9Q7RTT3 188 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 FOXRED2Q8IWF2 684 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 STPG2Q8N412 459 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 WFDC9Q8NEX5 89 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 OR4A5Q8NH83 315 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 DCUN1D4Q92564 292 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 PRR13Q9NZ81 148 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 MBD2Q9UBB5 411 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
PRPF40A-204ENST00000450303 NDUFA3O95167 84 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 IGKV1-39P01597 117 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 IGKV1D-39P04432 117 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 HOXB5P09067 269 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 VDAC1P21796 283 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 RPL23AP62750 156 aaKnown RBP13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 SLC35B1P78383 322 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 PSG5Q15238 335 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 PRSS54Q6PEW0 395 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 SLC35G3Q8N808 338 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 LHFPL5Q8TAF8 219 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 ARPC5LQ9BPX5 153 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 HSPB9Q9BQS6 159 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 BET1LQ9NYM9 111 aa13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 METTL1Q9UBP6 276 aaKnown RBP13.37□□□□□ -0.27
PRPF40A-204ENST00000450303 SRRM4A7MD48 611 aaKnown RBP13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 SLC25A17O43808 307 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 CFDP00746 253 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 IGLV2-23P01705 113 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 SAA1P0DJI8 122 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 EIF5AP63241 154 aaKnown RBP13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 LCNL1Q6ZST4 164 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 PHYHIPLQ96FC7 376 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 RITA1Q96K30 269 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 CITED4Q96RK1 184 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 SPIN2AQ99865 258 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 SPIN2BQ9BPZ2 258 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 TMEM140Q9NV12 185 aa13.36□□□□□ -0.27
PRPF40A-204ENST00000450303 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 AP4M1O00189 453 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 ADAP1O75689 374 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 CNTFRP26992 372 aa13.35□□□□□ -0.27
PRPF40A-204ENST00000450303 C5orf64Q2M2E5 130 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms