RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 E7EUB6 86 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 TSC22D2O75157 780 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 RPL27AP46776 148 aaKnown RBP15.28■□□□□ 0.04
RPS28-202ENST00000449223 TNXAQ16473 311 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 C10orf55Q5SWW7 151 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 ZNF546Q86UE3 836 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 SRSF12Q8WXF0 261 aaKnown RBP15.28■□□□□ 0.04
RPS28-202ENST00000449223 LYRM2Q9NU23 88 aaPredicted RBP15.28■□□□□ 0.04
RPS28-202ENST00000449223 A0A1W2PN81 502 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 CEBPZOSA8MTT3 80 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 GPR137BO60478 399 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 SRD5A1P18405 259 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 CHRNA7P36544 502 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 CX3CL1P78423 397 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 LY6EQ16553 131 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 HSD17B13Q7Z5P4 300 aaPredicted RBP15.27■□□□□ 0.04
RPS28-202ENST00000449223 SIGLECL1Q8N7X8 197 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 DCUN1D4Q92564 292 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 AQP10Q96PS8 301 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 CLCC1Q96S66 551 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 PLEKHA3Q9HB20 300 aa15.27■□□□□ 0.04
RPS28-202ENST00000449223 IGHV7-81A0A0B4J1V7 117 aa15.27■□□□□ 0.03
RPS28-202ENST00000449223 HOXA3O43365 443 aaPredicted RBP15.27■□□□□ 0.03
RPS28-202ENST00000449223 ZNF345Q14585 488 aa15.27■□□□□ 0.03
RPS28-202ENST00000449223 BSXQ3C1V8 233 aa15.27■□□□□ 0.03
RPS28-202ENST00000449223 IGLC7A0M8Q6 106 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 RNF222A6NCQ9 220 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 TEX22C9J3V5 150 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 L7N2F9 121 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 HOXA1P49639 335 aaPredicted RBP15.26■□□□□ 0.03
RPS28-202ENST00000449223 RPL23AP62750 156 aaKnown RBP15.26■□□□□ 0.03
RPS28-202ENST00000449223 VAMP2P63027 116 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 SPINK9Q5DT21 86 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 OR2C3Q8N628 320 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 HIPK2Q9H2X6 1198 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 U3KQ87 197 aa15.26■□□□□ 0.03
RPS28-202ENST00000449223 CLDN34H7C241 214 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 ARPC5O15511 151 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 OPN1MWP04001 364 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 OPN1MW2P0DN77 364 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 OPN1MW3P0DN78 364 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 IAPPP10997 89 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 ATP5IP56385 69 aaPredicted RBP15.25■□□□□ 0.03
RPS28-202ENST00000449223 NDPQ00604 133 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 FXYD3Q14802 87 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 ACOT7LQ6ZUV0 252 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 MRPL41Q8IXM3 137 aaKnown RBP15.25■□□□□ 0.03
RPS28-202ENST00000449223 INO80EQ8NBZ0 244 aaPredicted RBP15.25■□□□□ 0.03
RPS28-202ENST00000449223 ARPC1AQ92747 370 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 GSX1Q9H4S2 264 aaPredicted RBP15.25■□□□□ 0.03
RPS28-202ENST00000449223 PSENENQ9NZ42 101 aa15.25■□□□□ 0.03
RPS28-202ENST00000449223 GNB1P62873 340 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 WT1-ASQ06250 92 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 OR2F1Q13607 317 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 TMEM14EPQ6UXP3 125 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 RBMS3Q6XE24 437 aaKnown RBP15.24■□□□□ 0.03
RPS28-202ENST00000449223 C9orf62Q8N4C0 152 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 ZNF114Q8NC26 417 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 OR10W1Q8NGF6 305 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 GRPEL2Q8TAA5 225 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 HSPB9Q9BQS6 159 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 ENY2Q9NPA8 101 aa15.24■□□□□ 0.03
RPS28-202ENST00000449223 HEYLQ9NQ87 328 aaPredicted RBP15.24■□□□□ 0.03
RPS28-202ENST00000449223 MSGN1A6NI15 193 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 CNIH1O95406 144 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 HKR1P10072 659 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 EIF2B2P49770 351 aaKnown RBP15.23■□□□□ 0.03
RPS28-202ENST00000449223 CRIP2P52943 208 aaPredicted RBP15.23■□□□□ 0.03
RPS28-202ENST00000449223 RPP30P78346 268 aaKnown RBP15.23■□□□□ 0.03
RPS28-202ENST00000449223 LAMTOR1Q6IAA8 161 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 TMEM252Q8N6L7 170 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 HINT2Q9BX68 163 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 MFFQ9GZY8 342 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 SLC25A31Q9H0C2 315 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 MAST4O15021 2626 aa15.23■□□□□ 0.03
RPS28-202ENST00000449223 INAFM1C9JVW0 142 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 IGHG2P01859 326 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 EGR2P11161 476 aaPredicted RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 CXCL2P19875 107 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 RPL12P30050 165 aaKnown RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 HTR2BP41595 481 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 CAV2P51636 162 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 NKX2-5P52952 324 aaPredicted RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 ERHP84090 104 aaKnown RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 BAXQ07812 192 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 LGALSLQ3ZCW2 172 aaPredicted RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 STPG2Q8N412 459 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 SGMS2Q8NHU3 365 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 OR4C12Q96R67 309 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 ZNF580Q9UK33 172 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 STRAPQ9Y3F4 350 aaKnown RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 C15orf62A8K5M9 175 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 SCAF4O95104 1147 aaKnown RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 NUP62P37198 522 aaPredicted RBP15.22■□□□□ 0.03
RPS28-202ENST00000449223 C2orf83Q53S99 150 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 PVRIGQ6DKI7 326 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 KCNRGQ8N5I3 272 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 TMEM170AQ8WVE7 144 aa15.22■□□□□ 0.03
RPS28-202ENST00000449223 TMEM68Q96MH6 324 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms