RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FAM90A12PA8MX19 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A5PA8MXJ8 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A23PA8MXZ1 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 DUSP14O95147 198 aaKnown RBP7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A15PP0C7V4 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A13PP0C7W8 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A14PP0C7W9 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A24PP0C7X0 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 MPV17P39210 176 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 MAVSQ7Z434 540 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 GPBAR1Q8TDU6 330 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 ABCA2Q9BZC7 2435 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 COL1A1P02452 1464 aaPredicted RBP7.67□□□□□ -1.18
NIPBL-202ENST00000448238 FAM90A9PA6NNJ1 464 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 IGKV3-20P01619 116 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 RUNX1Q01196 453 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 CCL1P22362 96 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 C6orf226Q5I0X4 101 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 APCDD1LQ8NCL9 501 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 MYMXA0A1B0GTQ4 84 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 IL18BPO95998 194 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 GCHFRP30047 84 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 NEGR1Q7Z3B1 354 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 ELSPBP1Q96BH3 223 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 IFI27L1Q96BM0 104 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 GNB1LQ9BYB4 327 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 ST6GALNAC2Q9UJ37 374 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 R4GN57 208 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 TRGV11A0A075B6L2 103 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 PTGDSP41222 190 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 UBE2V1Q13404 147 aa7.67□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM229AB2RXF0 380 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 COL10A1Q03692 680 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 LINC00615Q96LM1 132 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-202ENST00000448238 THADAQ6YHU6 1953 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 CD7P09564 240 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 FGF12P61328 243 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 PPP1R27Q86WC6 154 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 NUP98P52948 1817 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 TECTAO75443 2155 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 A0A0A6YYD5 115 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 FUT5Q11128 374 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 PIGYQ3MUY2 71 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 FGFRL1Q8N441 504 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 HTN3P15516 51 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 NPC2P61916 151 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM167AQ8TBQ9 72 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 TMEFF2Q9UIK5 374 aaPredicted RBP7.66□□□□□ -1.18
NIPBL-202ENST00000448238 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 NDUFS5O43920 106 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 ISXQ2M1V0 245 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 TTC28Q96AY4 2481 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 HLA-DQB1P01920 261 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 GLRXP35754 106 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 PRR7Q8TB68 274 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 RNASE4P34096 147 aaKnown RBP7.66□□□□□ -1.18
NIPBL-202ENST00000448238 CLLU1OSQ5K130 101 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 PKIGQ9Y2B9 76 aa7.66□□□□□ -1.18
NIPBL-202ENST00000448238 FAM208AQ9UK61 1670 aaKnown RBP7.66□□□□□ -1.18
NIPBL-202ENST00000448238 FAM19A2Q8N3H0 131 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 OTORQ9NRC9 128 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 ROBO1Q9Y6N7 1651 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 DMKNQ6E0U4 476 aaPredicted RBP7.65□□□□□ -1.18
NIPBL-202ENST00000448238 RPUSD1Q9UJJ7 312 aaKnown RBP7.65□□□□□ -1.18
NIPBL-202ENST00000448238 ARHGAP21Q5T5U3 1957 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 C9orf40Q8IXQ3 194 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 TMEM158Q8WZ71 300 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 A0A0U1RQS6 177 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 FOXH1O75593 365 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 CYP2G1PQ6ZSU1 146 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 ABHD12Q8N2K0 398 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 ATP6V0BQ99437 205 aa7.65□□□□□ -1.18
NIPBL-202ENST00000448238 P2RY6Q15077 328 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 SSBP3Q9BWW4 388 aaPredicted RBP7.65□□□□□ -1.19
NIPBL-202ENST00000448238 SONP18583 2426 aaKnown RBP7.65□□□□□ -1.19
NIPBL-202ENST00000448238 CCL2P13500 99 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 COX6B1P14854 86 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 UNC119Q13432 240 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 XAF1Q6GPH4 301 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 TEX43Q6ZNM6 134 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 BRK1Q8WUW1 75 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 OR5P3Q8WZ94 311 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 PHIPQ8WWQ0 1821 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 MP68P56378 58 aa7.65□□□□□ -1.19
NIPBL-202ENST00000448238 TANC2Q9HCD6 1990 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 BCL6BQ8N143 479 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-202ENST00000448238 ASB1Q9Y576 335 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 HAMPP81172 84 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 C9JAW5 83 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 ZNF660Q6AZW8 331 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-202ENST00000448238 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
NIPBL-202ENST00000448238 CLEC7AQ9BXN2 247 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 FGF22Q9HCT0 170 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 TRGV3P03979 118 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 CD5P06127 495 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 NBL1P41271 181 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
NIPBL-202ENST00000448238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.64□□□□□ -1.191e-6■■■■■ 45.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms