RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 LPCAT3Q6P1A2 487 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 OR1L8Q8NGR8 309 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 THYN1Q9P016 225 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 NSG2Q9Y328 171 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 SELENOKQ9Y6D0 94 aa13.39□□□□□ -0.27
DDX56-207ENST00000448192 C3orf84H3BNL1 204 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 CYB5BO43169 146 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 GABARAPO95166 117 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 SERPINE2P07093 398 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 CBLN1P23435 193 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 GPR183P32249 361 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 CD81P60033 236 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 CTF1Q16619 201 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 GUCA2BQ16661 112 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 GPR107Q5VW38 600 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 THOC7Q6I9Y2 204 aaKnown RBP13.38□□□□□ -0.27
DDX56-207ENST00000448192 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 CACNG8Q8WXS5 425 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 AP3S1Q92572 193 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 OR51B2Q9Y5P1 312 aa13.38□□□□□ -0.27
DDX56-207ENST00000448192 ZNF785A8K8V0 405 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 M0QYG6 137 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 WT1-ASQ06250 92 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 HSD17B13Q7Z5P4 300 aaPredicted RBP13.37□□□□□ -0.27
DDX56-207ENST00000448192 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 LAX1Q8IWV1 398 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 MUC7Q8TAX7 377 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 ZNF502Q8TBZ5 544 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 NEURL2Q9BR09 285 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 PLEKHA3Q9HB20 300 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 NDUFA4L2Q9NRX3 87 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 SLC2A8Q9NY64 477 aa13.37□□□□□ -0.27
DDX56-207ENST00000448192 TECRQ9NZ01 308 aaKnown RBP13.37□□□□□ -0.27
DDX56-207ENST00000448192 TPPPO94811 219 aa13.36□□□□□ -0.27
DDX56-207ENST00000448192 ZNF182P17025 639 aaPredicted RBP13.36□□□□□ -0.27
DDX56-207ENST00000448192 PTBP1P26599 531 aaKnown RBP eCLIP13.36□□□□□ -0.27
DDX56-207ENST00000448192 HAGHQ16775 308 aa13.36□□□□□ -0.27
DDX56-207ENST00000448192 PLET1Q6UQ28 207 aa13.36□□□□□ -0.27
DDX56-207ENST00000448192 SLC38A6Q8IZM9 456 aa13.36□□□□□ -0.27
DDX56-207ENST00000448192 WDR89Q96FK6 387 aaPredicted RBP13.36□□□□□ -0.27
DDX56-207ENST00000448192 EXTL2Q9UBQ6 330 aa13.36□□□□□ -0.27
DDX56-207ENST00000448192 KLK11Q9UBX7 282 aa13.36□□□□□ -0.27
DDX56-207ENST00000448192 IGHV3-35A0A0C4DH35 117 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 TMEM213A2RRL7 107 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 IFNA6P05013 189 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 CD7P09564 240 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 UCP3P55916 312 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 TM4SF20Q53R12 229 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 CADM3Q8N126 398 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 VN1R17PQ8TDU5 208 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 LSM10Q969L4 123 aaKnown RBP13.35□□□□□ -0.27
DDX56-207ENST00000448192 SPATA25Q9BR10 227 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 FKBP11Q9NYL4 201 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 PRNDQ9UKY0 176 aa13.35□□□□□ -0.27
DDX56-207ENST00000448192 IGHV3-21A0A0B4J1V1 117 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 DBX1A6NMT0 343 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 A8MWP6 167 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 RNASE10Q5GAN6 216 aaKnown RBP13.34□□□□□ -0.27
DDX56-207ENST00000448192 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
DDX56-207ENST00000448192 UNQ9165/PRO28630Q6UXU0 137 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 OR52I2Q8NH67 350 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 TSC22D3Q99576 134 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 MRPS26Q9BYN8 205 aaKnown RBP13.34□□□□□ -0.27
DDX56-207ENST00000448192 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
DDX56-207ENST00000448192 MLXQ9UH92 298 aa13.34□□□□□ -0.27
DDX56-207ENST00000448192 F11RQ9Y624 299 aaKnown RBP13.34□□□□□ -0.27
DDX56-207ENST00000448192 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 C15orf61A6NNL5 157 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 PGAM2P15259 253 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 MFAP2P55001 183 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 H2BFWTQ7Z2G1 175 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 GPR141Q7Z602 305 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 TMEM61Q8N0U2 210 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 DEFB125Q8N687 156 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 OR5B3Q8NH48 314 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 OR4A16Q8NH70 328 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 CITED4Q96RK1 184 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 WFDC10AQ9H1F0 79 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 PALMDQ9NP74 551 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 TMEM14BQ9NUH8 114 aa13.33□□□□□ -0.28
DDX56-207ENST00000448192 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 TGOLN2O43493 480 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 IGKV1-39P01597 117 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 CD3DP04234 171 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 IGKV1D-39P04432 117 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 LYL1P12980 280 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 PI3P19957 117 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 CASC10Q5T4H9 136 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 BTNL8Q6UX41 500 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 UBAC2Q8NBM4 344 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 MRGPRFQ96AM1 343 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 SEC22AQ96IW7 307 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 ABHD1Q96SE0 405 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 CEPT1Q9Y6K0 416 aa13.32□□□□□ -0.28
DDX56-207ENST00000448192 RGS5O15539 181 aa13.31□□□□□ -0.28
DDX56-207ENST00000448192 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms