RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 ZNF355PQ9NSJ1 428 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 CACNG5Q9UF02 275 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
HLA-DOB-207ENST00000447394 A0A0B4J2A0 478 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 ST8SIA3O43173 380 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 ADAP1O75689 374 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 HOXB5P09067 269 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 DEFA1P59665 94 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 DEFA3P59666 94 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 WT1-ASQ06250 92 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 TMEM267Q0VDI3 215 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 NMSQ5H8A3 153 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 CXorf66Q5JRM2 361 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 FAM219AQ8IW50 185 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 OR1L8Q8NGR8 309 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 IL22RA2Q969J5 263 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 GNB4Q9HAV0 340 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 NDUFA4L2Q9NRX3 87 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 SHPKQ9UHJ6 478 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.76
HLA-DOB-207ENST00000447394 MPTX1A8MV57 137 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 ATG12O94817 140 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 TRGV3P03979 118 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 ELANEP08246 267 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 TRAPPC2P0DI81 140 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 TRAPPC2BP0DI82 140 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 RAB9AP51151 201 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 TPPP2P59282 170 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 RPL23AP62750 156 aaKnown RBP10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 SRPXP78539 464 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 KIAA0141Q14154 515 aaPredicted RBP10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 DEFB136Q30KP8 78 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 C8orf86Q6ZUL3 223 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 CADM3Q8N126 398 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 RNF152Q8N8N0 203 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 OR5M8Q8NGP6 311 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 LSM10Q969L4 123 aaKnown RBP10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 DUX3Q96PT4 197 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 ALX4Q9H161 411 aaPredicted RBP10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 DMRT1Q9Y5R6 373 aa10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 TSSC4Q9Y5U2 329 aaPredicted RBP10.32□□□□□ -0.76
HLA-DOB-207ENST00000447394 NUDT19A8MXV4 375 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 CCSO14618 274 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 DUS4LO95620 317 aaKnown RBP10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 FGF2P09038 288 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 OR13C7P0DN81 318 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 PSMB6P28072 239 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 MECP2P51608 486 aaKnown RBP10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 GGNBP1Q5YKI7 109 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 TMEM65Q6PI78 240 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 NDUFA11Q86Y39 141 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 TTC9CQ8N5M4 171 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 COMMD1Q8N668 190 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 ZNF491Q8N8L2 437 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 LRTM2Q8N967 370 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 DUSP18Q8NEJ0 188 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 OR5B3Q8NH48 314 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 MYOZ3Q8TDC0 251 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 S4R3C0 116 aa10.31□□□□□ -0.76
HLA-DOB-207ENST00000447394 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 IFNA17P01571 189 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 SULT1A3P0DMM9 295 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 SULT1A4P0DMN0 295 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 CTRB1P17538 263 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 MFAP2P55001 183 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 HSPE1P61604 102 aaKnown RBP10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 PRCDQ00LT1 54 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 CTRB2Q6GPI1 263 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 COQ8AQ8NI60 647 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 ZNF257Q9Y2Q1 563 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 VWFP04275 2813 aa10.3□□□□□ -0.76
HLA-DOB-207ENST00000447394 INMT-MINDY4F8WBC2 141 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 OR2J3O76001 311 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 RHOGP84095 191 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 DCTN2Q13561 401 aaKnown RBP10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 SMCO1Q147U7 214 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 PLET1Q6UQ28 207 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 ETV3LQ6ZN32 361 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 UXS1Q8NBZ7 420 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 ZNF431Q8TF32 576 aaPredicted RBP10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 MITD1Q8WV92 249 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 FANCD2OSQ96PS1 177 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 PLEKHA3Q9HB20 300 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 FKBP11Q9NYL4 201 aa10.29□□□□□ -0.76
HLA-DOB-207ENST00000447394 WNK1Q9H4A3 2382 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 DUXBA0A1W2PPF3 345 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 NDUFB8O95169 186 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 IGHV3-23P01764 117 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 CRYGCP07315 174 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 C2orf68Q2NKX9 166 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 AARDQ4LEZ3 155 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 OR1S1Q8NH92 325 aa10.28□□□□□ -0.76
HLA-DOB-207ENST00000447394 RAX2Q96IS3 184 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms