RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 IFNA21P01568 189 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 IGHV3-48P01763 117 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 IGHV3-23P01764 117 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 IL6RP08887 468 aaPredicted RBP5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 SULT1A3P0DMM9 295 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 SULT1A4P0DMN0 295 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 MDKP21741 143 aaPredicted RBP5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 RPL27AP46776 148 aaKnown RBP5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 LGALS7P47929 136 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 HOXA1P49639 335 aaPredicted RBP5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 H2BFSP57053 126 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 RPL8P62917 257 aaKnown RBP5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 SCGB2A2Q13296 93 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 NMSQ5H8A3 153 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 SLC35E3Q7Z769 313 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 TEX45Q8NA69 505 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 LFNGQ8NES3 379 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 TMEM167AQ8TBQ9 72 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 FAM216AQ8WUB2 273 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 ARPC1AQ92747 370 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 RBKSQ9H477 322 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 PRDM13Q9H4Q3 707 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 ZNF355PQ9NSJ1 428 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 RCL1Q9Y2P8 373 aaKnown RBP5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 HIVEP2P31629 2446 aa5.96□□□□□ -1.45
SF3A3P1-201ENST00000446317 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 A0A0B4J2A0 478 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 C15orf61A6NNL5 157 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 SNRPGP15A8MWD9 76 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 RPLP1P05386 114 aaKnown RBP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 RNASE1P07998 156 aaKnown RBP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 P0C879 139 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 EGR2P11161 476 aaPredicted RBP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 VDAC2P45880 294 aaPredicted RBP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 RAG2P55895 527 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 SRPXP78539 464 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 SMCO1Q147U7 214 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 Q5BKY6 102 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 ASPHD1Q5U4P2 390 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 UNQ5815/PRO19632Q6UWF5 114 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 GSG1LQ6UXU4 331 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 OR5B12Q96R08 314 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 COMMD5Q9GZQ3 224 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 NPFFR1Q9GZQ6 430 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 ALX4Q9H161 411 aaPredicted RBP5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 SHPKQ9UHJ6 478 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 POMT1Q9Y6A1 747 aa5.96□□□□□ -1.46
SF3A3P1-201ENST00000446317 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 A0A1W2PN81 502 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 A0A1W2PRX2 142 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 ZNF98A6NK75 572 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 TEX22C9J3V5 150 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 CCNKO75909 580 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 SPDEFO95238 335 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 MBPP02686 304 aaPredicted RBP5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 OR13C7P0DN81 318 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 VDAC1P21796 283 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 CHRNA7P36544 502 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 COMPP49747 757 aaPredicted RBP5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 RRAS2P62070 204 aaPredicted RBP5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 TMEM267Q0VDI3 215 aaPredicted RBP5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 RAB32Q13637 225 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 AANATQ16613 207 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 KHDC1LQ5JSQ8 128 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 MMD2Q8IY49 270 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 LRTM2Q8N967 370 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 OR5M8Q8NGP6 311 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 IL22RA2Q969J5 263 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 ANAPC16Q96DE5 110 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 PRSS22Q9GZN4 317 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 RANGRFQ9HD47 186 aaPredicted RBP5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 RAB18Q9NP72 206 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 COA4Q9NYJ1 87 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 BET1LQ9NYM9 111 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 OR5AC2Q9NZP5 309 aa5.95□□□□□ -1.46
SF3A3P1-201ENST00000446317 TRAV41A0A0B4J266 112 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 PRSS47A8MTI9 375 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 FGF16O43320 207 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 ATG12O94817 140 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 HLA-DRB1P01911 266 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 TRAPPC2P0DI81 140 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 TRAPPC2BP0DI82 140 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 PF4V1P10720 104 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 WT1-ASQ06250 92 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 POU2AF1Q16633 256 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 FAM209BQ5JX69 171 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 C18orf65Q6ZTR6 163 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 KLHDC1Q8N7A1 406 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 TCTEX1D1Q8N7M0 179 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 OR4D5Q8NGN0 318 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 VSTM2AQ8TAG5 236 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 LSM10Q969L4 123 aaKnown RBP5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 PINX1Q96BK5 328 aaKnown RBP5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 C2orf50Q96LR7 162 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 JMJD8Q96S16 334 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 RNF5Q99942 180 aa5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 ZNF436Q9C0F3 470 aaPredicted RBP5.94□□□□□ -1.46
SF3A3P1-201ENST00000446317 HEYLQ9NQ87 328 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms