RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
SEC13-213ENST00000445064 VN1R17PQ8TDU5 208 aa11.5□□□□□ -0.57
SEC13-213ENST00000445064 SRSF8Q9BRL6 282 aaKnown RBP11.5□□□□□ -0.57
SEC13-213ENST00000445064 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
SEC13-213ENST00000445064 ZNF436Q9C0F3 470 aaPredicted RBP11.5□□□□□ -0.57
SEC13-213ENST00000445064 HYDINQ4G0P3 5121 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 IGHV3-21A0A0B4J1V1 117 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 OR2T8A6NH00 312 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 CBX5P45973 191 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 RFX2P48378 723 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 WT1-ASQ06250 92 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 SLC38A6Q8IZM9 456 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 CD300LFQ8TDQ1 290 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 HINT2Q9BX68 163 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 C5orf66Q9H5L9 145 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 EHFQ9NZC4 300 aa11.49□□□□□ -0.57
SEC13-213ENST00000445064 A0A0J9YWU9 116 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 CYB5BO43169 146 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
SEC13-213ENST00000445064 ATP6V1G2O95670 118 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 LPAR6P43657 344 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 MFAP2P55001 183 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 HERV-K104P61576 105 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 EWSR1Q01844 656 aaKnown RBP eCLIP11.48□□□□□ -0.57
SEC13-213ENST00000445064 PMS2P11Q13670 270 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 NEDD8Q15843 81 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 DHRS11Q6UWP2 260 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 GDPD1Q8N9F7 314 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 OR1L8Q8NGR8 309 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 Q9H521 79 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 IFT46Q9NQC8 304 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 COMMD9Q9P000 198 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 NSG2Q9Y328 171 aa11.48□□□□□ -0.57
SEC13-213ENST00000445064 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 CXorf65A6NEN9 183 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 XRCC3O43542 346 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 SPRY2O43597 315 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 KRASP01116 189 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 PMP2P02689 132 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 RLN1P04808 185 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 FGF2P09038 288 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 F2RP25116 425 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 TGFBR1P36897 503 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 ERVK-16P61578 105 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 FCAMRQ8WWV6 532 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 S100A16Q96FQ6 103 aaKnown RBP11.47□□□□□ -0.57
SEC13-213ENST00000445064 SPAG8Q99932 426 aaPredicted RBP11.47□□□□□ -0.57
SEC13-213ENST00000445064 ZNF2Q9BSG1 426 aaPredicted RBP11.47□□□□□ -0.57
SEC13-213ENST00000445064 CHRDL1Q9BU40 450 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 C20orf24Q9BUV8 137 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 NDUFA4L2Q9NRX3 87 aa11.47□□□□□ -0.57
SEC13-213ENST00000445064 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 TSPAN4O14817 238 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 ZNF207O43670 478 aaKnown RBP11.46□□□□□ -0.57
SEC13-213ENST00000445064 LY6G6CO95867 125 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 G6PCP35575 357 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 APOC4P55056 127 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 THOC7Q6I9Y2 204 aaKnown RBP11.46□□□□□ -0.57
SEC13-213ENST00000445064 LAMTOR1Q6IAA8 161 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 Q6ZWC4 215 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 HSD17B13Q7Z5P4 300 aaPredicted RBP11.46□□□□□ -0.57
SEC13-213ENST00000445064 WFDC3Q8IUB2 231 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 UBAC2Q8NBM4 344 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 SCARB1Q8WTV0 552 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 LINC00476Q8WZB0 136 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 BORCS5Q969J3 196 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 BSCL2Q96G97 398 aaPredicted RBP11.46□□□□□ -0.57
SEC13-213ENST00000445064 DAZ1Q9NQZ3 744 aaKnown RBP11.46□□□□□ -0.57
SEC13-213ENST00000445064 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 OR51B2Q9Y5P1 312 aa11.46□□□□□ -0.57
SEC13-213ENST00000445064 F11RQ9Y624 299 aaKnown RBP11.46□□□□□ -0.57
SEC13-213ENST00000445064 BIRC6Q9NR09 4857 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
SEC13-213ENST00000445064 NDUFA4O00483 81 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 SNAPC5O75971 98 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 ADMP35318 185 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 DEFB135Q30KP9 77 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 SPSB3Q6PJ21 355 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 LYG2Q86SG7 212 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 TSPAN14Q8NG11 270 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 LSM10Q969L4 123 aaKnown RBP11.45□□□□□ -0.58
SEC13-213ENST00000445064 MOB3AQ96BX8 217 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 DGCR14Q96DF8 476 aaKnown RBP11.45□□□□□ -0.58
SEC13-213ENST00000445064 TP53TG1Q9Y2A0 90 aa11.45□□□□□ -0.58
SEC13-213ENST00000445064 K7EIM0 57 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 K7EMT4 169 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
SEC13-213ENST00000445064 BMI1P35226 326 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 TNFRSF9Q07011 255 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 Q56UQ5 140 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 STPG3Q8N7X2 389 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 OR5H2Q8NGV7 314 aa11.44□□□□□ -0.58
SEC13-213ENST00000445064 DBX1A6NMT0 343 aa11.43□□□□□ -0.58
SEC13-213ENST00000445064 UBE2CO00762 179 aa11.43□□□□□ -0.58
SEC13-213ENST00000445064 TMEM127O75204 238 aa11.43□□□□□ -0.58
SEC13-213ENST00000445064 CTSDP07339 412 aaPredicted RBP11.43□□□□□ -0.58
SEC13-213ENST00000445064 CTSGP08311 255 aa11.43□□□□□ -0.58
SEC13-213ENST00000445064 RPS19P39019 145 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms