RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-216	ENST00000444878	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM39-216	ENST00000444878	PLXNB1	O43157	2135 aa		11.13	□□□□□ -0.63
RBM39-216	ENST00000444878		H3BQ15	152 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	DLL1	O00548	723 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	CYB5B	O43169	146 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	CA2	P00918	260 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	TAGLN2	P37802	199 aa	Known RBP	11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	TMEM177	Q53S58	311 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	RBMS3	Q6XE24	437 aa	Known RBP	11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	PDPN	Q86YL7	162 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	TGIF2LX	Q8IUE1	241 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	C11orf42	Q8N5U0	333 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878		Q8N7P7	452 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	ST6GALNAC6	Q969X2	333 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	TMEM133	Q9H2Q1	129 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	CBLN4	Q9NTU7	201 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	VAX2	Q9UIW0	290 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	TEX50	A0A1B0GTY4	177 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	SOX15	O60248	233 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	IL3RA	P26951	378 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	PLA2G5	P39877	138 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	ZNF137P	P52743	207 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	PMS2P11	Q13670	270 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	ZNF841	Q6ZN19	808 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	OR5B3	Q8NH48	314 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	RAB24	Q969Q5	203 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	NIPSNAP3B	Q9BS92	247 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	SPX	Q9BT56	116 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	NPVF	Q9HCQ7	196 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	ARHGAP32	A7KAX9	2087 aa		11.12	□□□□□ -0.63
RBM39-216	ENST00000444878	P2RX4	Q99571	388 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	WASHC3	Q9Y3C0	194 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	OPRK1	P41145	380 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	CDC34	P49427	236 aa	Predicted RBP	11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	RAB13	P51153	203 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	C15orf54	Q8N8G6	183 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	VSTM2A	Q8TAG5	236 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	MGST2	Q99735	147 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	PCGF1	Q9BSM1	259 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	COMMD5	Q9GZQ3	224 aa		11.11	□□□□□ -0.63
RBM39-216	ENST00000444878	TACC2	O95359	2948 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	COLCA2	A8K830	154 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	LY6H	O94772	140 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	DEFA4	P12838	97 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	USF1	P22415	310 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	PAX6	P26367	422 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	RPL8	P62917	257 aa	Known RBP	11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	OR8B3	Q8NGG8	313 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	TNFRSF14	Q92956	283 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	TVP23C	Q96ET8	276 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	NEIL1	Q96FI4	390 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	OR8B2	Q96RD0	313 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	GGTLC1	Q9BX51	225 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	TMPRSS5	Q9H3S3	457 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	TUBA4B	Q9H853	241 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	MIOX	Q9UGB7	285 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	MLX	Q9UH92	298 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	CACNA1A	O00555	2505 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	NAV3	Q8IVL0	2385 aa		11.1	□□□□□ -0.63
RBM39-216	ENST00000444878	IGHV2-26	A0A0B4J1V2	119 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	PPIAL4C	A0A0B4J2A2	164 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	SOD3	P08294	240 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	PPIAL4G	P0DN37	164 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	MC5R	P33032	325 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	PSMB3	P49720	205 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	PRRX1	P54821	245 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	TEPP	Q6URK8	271 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	TIMD4	Q96H15	378 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	PXMP4	Q9Y6I8	212 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	PKD1L2	Q7Z442	2459 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878		A0A1W2PPV4	95 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	ATP5I	P56385	69 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	MEF2B	Q02080	365 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	GCSAML	Q5JQS6	135 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	WDR25	Q64LD2	544 aa	Predicted RBP	11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	FAM90A2P	Q658T7	463 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	C11orf71	Q6IPW1	123 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	OR1L8	Q8NGR8	309 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	OR4A5	Q8NH83	315 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	RAB1C	Q92928	201 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	ISOC2	Q96AB3	205 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	KCNIP2	Q9NS61	270 aa		11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	LSM4	Q9Y4Z0	139 aa	Known RBP	11.09	□□□□□ -0.63
RBM39-216	ENST00000444878	SEC14L6	B5MCN3	397 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	DLX1	P56177	255 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	RAB31	Q13636	194 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	MIC13	Q5XKP0	118 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	SLC35E3	Q7Z769	313 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	TMEM167A	Q8TBQ9	72 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	NEU4	Q8WWR8	484 aa	Predicted RBP	11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	PATZ1	Q9HBE1	687 aa	Known RBP	11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	MANBAL	Q9NQG1	85 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	hCG_1809904	A0A1W2PP81	198 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878		A0A1W2PPE2	198 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878		A0A1W2PR64	198 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878		A0A1W2PRV1	198 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	ENSA	O43768	121 aa	Known RBP	11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	CRYBA1	P05813	215 aa		11.08	□□□□□ -0.64
RBM39-216	ENST00000444878	ERH	P84090	104 aa	Known RBP	11.08	□□□□□ -0.64

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