RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TRAV30A0A087WSZ9 112 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 A0A087WWC5 75 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IGHV3-43A0A0B4J1X8 118 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TRAV39A0A0B4J263 110 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IGHV3-64DA0A0J9YX35 117 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 A0A1W2PPI3 338 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TMEM89A2RUT3 159 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 C15orf62A8K5M9 175 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 NPIPB5A8MRT5 1133 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 B4DSR2 109 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RNASEK-C17orf49H0YIS7 233 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 I3L521 148 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RRHO14718 337 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SLC31A2O15432 143 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 NBR2O15453 112 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 PDE6DO43924 150 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CLN5O75503 358 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 MMP23AO75900 390 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CST7O76096 145 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 ZNF205O95201 554 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 VENTXO95231 258 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 MOSP00540 346 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IFNA10P01566 189 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IGLV2-23P01705 113 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 HLA-DRB1P01911 266 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 PRH1P02810 166 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 OPN1MWP04001 364 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IGKV1-16P04430 117 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 STAG3L2P0CL84 134 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 STAG3L3P0CL85 134 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SAA1P0DJI8 122 aaPredicted RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 OPN1MW2P0DN77 364 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 OPN1MW3P0DN78 364 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IGHV3-43DP0DP04 118 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 AREGP15514 252 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 HIST1H1BP16401 226 aaKnown RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CCL3L1P16619 93 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RAB9AP51151 201 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CRIP2P52943 208 aaPredicted RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 LGALS4P56470 323 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TAS2R45P59539 299 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RPS16P62249 146 aaKnown RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RHOBP62745 196 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CD69Q07108 199 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 LOXL1Q08397 574 aaPredicted RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 PRSS8Q16651 343 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 GUCA2BQ16661 112 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 ACOT6Q3I5F7 207 aaPredicted RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 AKIRIN2Q53H80 203 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RPL39P5Q59GN2 51 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TOR2AQ5JU69 321 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 ZNF506Q5JVG8 444 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SPANXN5Q5MJ07 72 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 FAM201AQ5SY85 155 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TPTE2P1Q5T6R2 138 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TREML4Q6UXN2 200 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 ETV3LQ6ZN32 361 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 PQLC2Q6ZP29 291 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 Q6ZRG5 221 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 C9orf139Q6ZV77 190 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SLC35E3Q7Z769 313 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 LURAP1LQ8IV03 231 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 Q8N6K4 173 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 THAP8Q8NA92 274 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 OR1L4Q8NGR5 311 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 GATAD1Q8WUU5 269 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CFHR4Q92496 578 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 ZDHHC16Q969W1 377 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 RPEQ96AT9 228 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SMIM12Q96EX1 92 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CYYR1Q96J86 154 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 BTF3L4Q96K17 158 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 OR4C12Q96R67 309 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 CCL19Q99731 98 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SCRT1Q9BWW7 348 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 MRPL32Q9BYC8 188 aaKnown RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SLC35B3Q9H1N7 401 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 TMEM167BQ9NRX6 74 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 SLC39A9Q9NUM3 307 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 PRR13Q9NZ81 148 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 PITPNC1Q9UKF7 332 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 OR51B2Q9Y5P1 312 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 LY96Q9Y6Y9 160 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 IGSF10Q6WRI0 2623 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 DOPEY1Q5JWR5 2465 aa2.28□□□□□ -2.04
LINC00393-201ENST00000443621 LRBAP50851 2863 aa2.28□□□□□ -2.05
LINC00393-201ENST00000443621 CHD8Q9HCK8 2581 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 YLPM1P49750 1951 aaKnown RBP2.27□□□□□ -2.05
LINC00393-201ENST00000443621 NCOR2Q9Y618 2525 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 SPTBN2O15020 2390 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 HRNRQ86YZ3 2850 aaPredicted RBP2.27□□□□□ -2.05
LINC00393-201ENST00000443621 A0A1W2PPR1 153 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 A0A1W2PRE2 83 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 RBFOX3A6NFN3 312 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 PGPEP1LA6NFU8 196 aa2.27□□□□□ -2.05
LINC00393-201ENST00000443621 FBLL1A6NHQ2 334 aaKnown RBP2.27□□□□□ -2.05
LINC00393-201ENST00000443621 SRRM4A7MD48 611 aaKnown RBP2.27□□□□□ -2.05
LINC00393-201ENST00000443621 FAM157AC9JC47 383 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms