RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 G3V4G9 280 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 CER1O95813 267 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 CCL5P13501 91 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 ZNF137PP52743 207 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 RAC3P60763 192 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 RBPJQ06330 500 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 CRIP3Q6Q6R5 217 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 ZNF837Q96EG3 531 aaPredicted RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 RARRES3Q9UL19 164 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 AMMECR1Q9Y4X0 333 aaPredicted RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 DEFA4P12838 97 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 APOBEC3AP31941 199 aaPredicted RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 SLC25A53Q5H9E4 307 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 Q8N976 141 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 NHLRC2Q8NBF2 726 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 S1PR3Q99500 378 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 REPIN1Q9BWE0 567 aaKnown RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 ZG16O60844 167 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 MRPS21P82921 87 aaKnown RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 TMEM108Q6UXF1 575 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 SLC22A18ASQ8N1D0 253 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 VSTM2AQ8TAG5 236 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 SLC25A40Q8TBP6 338 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 CHCHD1Q96BP2 118 aaKnown RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 SSBP3Q9BWW4 388 aaPredicted RBP4.21□□□□□ -1.74
HERC1-201ENST00000443617 DLL3Q9NYJ7 618 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 CDIPTO14735 213 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 LTC4SQ16873 150 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 RCHY1Q96PM5 261 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 PRDM14Q9GZV8 571 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 ZNF355PQ9NSJ1 428 aa4.21□□□□□ -1.74
HERC1-201ENST00000443617 A0A0G2JMM0 328 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 A0A1W2PPB8 328 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 KIR3DP1A8MWS1 328 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 P04436 131 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 AREGP15514 252 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SAMD5Q5TGI4 173 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 OR8A1Q8NGG7 326 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ANKHD1Q8IWZ3 2542 aaKnown RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 IGLV3-1P01715 115 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 IGHV3-9P01782 118 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SNAI2O43623 268 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 LGALS7P47929 136 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ARG2P78540 354 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 DTX1Q86Y01 620 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SPACA3Q8IXA5 215 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 MGST2Q99735 147 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 TLN1Q9Y490 2541 aaKnown RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 SMIM27A0A1W2PRY6 76 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 C15orf62A8K5M9 175 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 CA1P00915 261 aaPredicted RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 IGKV1-39P01597 117 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 IGKV1D-39P04432 117 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 H3BRM9 83 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 FOXH1O75593 365 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 LIFP15018 202 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SPINK2P20155 84 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 AZU1P20160 251 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 C20orf204Q6ZNR8 217 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 WDR31Q8NA23 367 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 OR4X2Q8NGF9 303 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 OBP2BQ9NPH6 170 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 K7EN84 100 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 FCGR3BO75015 233 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 CGAP01215 116 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 CCL2P13500 99 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ZNF585BQ52M93 769 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ZNF295-AS1Q8N0V1 137 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 PRSS3P2Q8NHM4 247 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 PSMB11A5LHX3 300 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 J3QT63 122 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 COL9A1P20849 921 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SARAFQ96BY9 339 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 RTL8AQ9BWD3 113 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 LIPFP07098 398 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 HOXC12P31275 282 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 NTF4P34130 210 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 DSCR4P56555 118 aaPredicted RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 PTPRQQ9UMZ3 2332 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ANAPC1Q9H1A4 1944 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 C9orf172C9J069 976 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SAP30O75446 220 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 NABP1Q96AH0 204 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 PRNDQ9UKY0 176 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 PPIAL4CA0A0B4J2A2 164 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 COX7A2P2O60397 106 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 PPIAL4GP0DN37 164 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 CD27P26842 260 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 HSD52Q0P140 79 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 TRAV8-6A0A0B4J262 113 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 P01737 135 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 SP1P08047 785 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 VWC2Q2TAL6 325 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 MIR17HGQ75NE6 70 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 TPRX1Q8N7U7 411 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 WIPF2Q8TF74 440 aaPredicted RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 HIGD1CA8MV81 97 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 FTH1P19P0C7X4 201 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms