RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 CD55P08174 381 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 QRFPP83859 136 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 ZNF581Q9P0T4 197 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 OR1P1Q8NH06 330 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 HSPB7Q9UBY9 170 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 C19orf24Q9BVV8 132 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 IFI27L2Q9H2X8 130 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 PLXND1Q9Y4D7 1925 aa18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 KIR2DL2P43627 348 aaPredicted RBP18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 C19orf35Q6ZS72 473 aa18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 ZCCHC14Q8WYQ9 949 aaKnown RBP18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 GSX1Q9H4S2 264 aaPredicted RBP18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 ACAA1P09110 424 aaPredicted RBP18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 LRTM2Q8N967 370 aa18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 LINC00312Q9Y6C7 94 aa18.77■□□□□ 0.6
CTDSPL-206ENST00000443503 FAM208BQ5VWN6 2430 aa18.77■□□□□ 0.59
CTDSPL-206ENST00000443503 DIRC3C9JPN6 131 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 MORN2Q502X0 79 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 TMEM177Q53S58 311 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 TMEM116Q8NCL8 245 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 MAP1LC3CQ9BXW4 147 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 MRPL18Q9H0U6 180 aaKnown RBP18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 TICRRQ7Z2Z1 1910 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 PSPNO60542 156 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 YPEL1O60688 119 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 GATA2P23769 480 aaPredicted RBP18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 YPEL2Q96QA6 119 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 FGF16O43320 207 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 CGAP01215 116 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 HLA-DQA1P01909 254 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 CYP2G1PQ6ZSU1 146 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 OR4D5Q8NGN0 318 aa18.76■□□□□ 0.59
CTDSPL-206ENST00000443503 SAA2-SAA4A0A096LPE2 208 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 LILRA1O75019 489 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 SAA2P0DJI9 122 aaPredicted RBP18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 MEF2CQ06413 473 aaPredicted RBP18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 CENPWQ5EE01 88 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 TMEM42Q69YG0 159 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 GGACTQ9BVM4 153 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 SSBP3Q9BWW4 388 aaPredicted RBP18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 HGFACQ04756 655 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 PKIAP61925 76 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 PRB3Q04118 309 aaPredicted RBP18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 SRSF6Q13247 344 aaKnown RBP18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 CLDND2Q8NHS1 167 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 SELLP14151 372 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 MDS2Q8NDY4 140 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 SFRP2Q96HF1 295 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 DPM3Q9P2X0 92 aa18.75■□□□□ 0.59
CTDSPL-206ENST00000443503 GTF3C1Q12789 2109 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 NAPSAO96009 420 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 WFIKKN1Q96NZ8 548 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 WFDC1Q9HC57 220 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 SPANXN1Q5VSR9 72 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 OR8A1Q8NGG7 326 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 CGB1A6NKQ9 187 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 ATP5J2P56134 94 aa18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 MRPL32Q9BYC8 188 aaKnown RBP18.74■□□□□ 0.59
CTDSPL-206ENST00000443503 TMEM189A5PLL7 270 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 NPIPB11E5RHQ5 1161 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 IL4P05112 153 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 ATP5G3P48201 142 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 LINC00305Q7Z4B0 112 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 BET1LQ9NYM9 111 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 SH2D7A6NKC9 451 aaPredicted RBP18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 E9PLN8 166 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 CDX1P47902 265 aaPredicted RBP18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 ACACBO00763 2458 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 PAFAH1B2P68402 229 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 TMEM78Q5T7P6 136 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 LINC00518Q8N0U6 118 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 S4R3C0 116 aa18.73■□□□□ 0.59
CTDSPL-206ENST00000443503 IGHV3OR16-10A0A075B7F0 116 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 GOLT1AQ6ZVE7 132 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 LOC389332A0A1B0GUA5 103 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 GRIFINA4D1Z8 144 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 CD81P60033 236 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 TRBV23-1A0A0A0MS06 115 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 VENTXO95231 258 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 PGLYRP4Q96LB8 373 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 DUTP33316 252 aaKnown RBP18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 CCL20P78556 96 aa18.72■□□□□ 0.59
CTDSPL-206ENST00000443503 SRRM5B3KS81 715 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 SAA1P0DJI8 122 aaPredicted RBP18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 METTL26Q96S19 204 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 LY6G6EA0A0G2JKS1 128 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 TFPI2P48307 235 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 LY6EQ16553 131 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 C16orf92Q96LL3 132 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 PLSCR4Q9NRQ2 329 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 U3KQA8 63 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 PLXNA2O75051 1894 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 LYNX1G3V0Z9 82 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 MGPP08493 103 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 LYNX1P0DP58 116 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 VPS25Q9BRG1 176 aa18.71■□□□□ 0.59
CTDSPL-206ENST00000443503 IGHV3OR16-13A0A075B7E8 117 aa18.7■□□□□ 0.58
CTDSPL-206ENST00000443503 TRAV30A0A087WSZ9 112 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms