RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 IGHV3OR16-8A0A075B7F1 116 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 UPK2O00526 184 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 CHEK1O14757 476 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 PSMA1P25786 263 aaKnown RBP10.46□□□□□ -0.73
HMGN1-208ENST00000443046 FABP5Q01469 135 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 TMEM187Q14656 261 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 FAM90A2PQ658T7 463 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 CNIH2Q6PI25 160 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 OR10W1Q8NGF6 305 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 AIFM2Q9BRQ8 373 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 DCSTAMPQ9H295 470 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 TAS2R8Q9NYW2 309 aa10.46□□□□□ -0.73
HMGN1-208ENST00000443046 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 IGHV7-4-1A0A0J9YVY3 117 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 C15orf61A6NNL5 157 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 PTGES3LE9PB15 166 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 RBFOX2O43251 390 aaKnown RBP eCLIP10.45□□□□□ -0.741e-18■□□□□ 8.3
HMGN1-208ENST00000443046 ZNF207O43670 478 aaKnown RBP10.45□□□□□ -0.74
HMGN1-208ENST00000443046 MRPS14O60783 128 aaKnown RBP10.45□□□□□ -0.74
HMGN1-208ENST00000443046 CA1P00915 261 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-208ENST00000443046 SERPINE2P07093 398 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 RBMY1A1P0DJD3 496 aaKnown RBP10.45□□□□□ -0.74
HMGN1-208ENST00000443046 RBMY1CP0DJD4 496 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 WT1-ASQ06250 92 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 ARL6IP1Q15041 203 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
HMGN1-208ENST00000443046 MSMO1Q15800 293 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 ZNF773Q6PK81 442 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 SCARB1Q8WTV0 552 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 OR10C1Q96KK4 312 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 RHPN1-AS1Q9BWJ2 59 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 HRASLSQ9HDD0 168 aa10.45□□□□□ -0.74
HMGN1-208ENST00000443046 IFITM5A6NNB3 132 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 CTSGP08311 255 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
HMGN1-208ENST00000443046 TAS2R31P59538 309 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 CDNFQ49AH0 187 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 HACD4Q5VWC8 232 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 NR2C2APQ86WQ0 139 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 RNF126Q9BV68 326 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 QTRT1Q9BXR0 403 aaKnown RBP10.44□□□□□ -0.74
HMGN1-208ENST00000443046 COMMD5Q9GZQ3 224 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 C21orf62Q9NYP8 219 aa10.44□□□□□ -0.74
HMGN1-208ENST00000443046 TRAV10A0A0B4J240 114 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 METTL21EPA6NDL7 271 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 K7EIM0 57 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 CYB5BO43169 146 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 NQO2P16083 231 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 OR10A3P58181 314 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 PVRIGQ6DKI7 326 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 THOC7Q6I9Y2 204 aaKnown RBP10.43□□□□□ -0.74
HMGN1-208ENST00000443046 Q6ZTC4 211 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 HSD17B13Q7Z5P4 300 aaPredicted RBP10.43□□□□□ -0.74
HMGN1-208ENST00000443046 SPAG16Q8N0X2 631 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 TMEM116Q8NCL8 245 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 ACOT13Q9NPJ3 140 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 ANXA10Q9UJ72 324 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 F11RQ9Y624 299 aaKnown RBP10.43□□□□□ -0.74
HMGN1-208ENST00000443046 AGRNO00468 2067 aa10.43□□□□□ -0.74
HMGN1-208ENST00000443046 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
HMGN1-208ENST00000443046 IGHV3-21A0A0B4J1V1 117 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 TRAV1-2A0A0B4J238 106 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 HPRT1P00492 218 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 TRAPPC2P0DI81 140 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 TRAPPC2BP0DI82 140 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 TFPI2P48307 235 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 MLLT11Q13015 90 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-208ENST00000443046 SLC25A24Q6NUK1 477 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 CCL28Q9NRJ3 127 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 NDUFA4L2Q9NRX3 87 aa10.42□□□□□ -0.74
HMGN1-208ENST00000443046 ELOA3CA0A087WX78 387 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-208ENST00000443046 ZNF705EA8MWA4 302 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-208ENST00000443046 TNFSF12O43508 249 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 SSX5O60225 188 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 HSMCR30P0CW71 290 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 MIFP14174 115 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 LGALS9BQ3B8N2 356 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 ZBTB34Q8NCN2 500 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 NUDCD2Q8WVJ2 157 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 DGCR14Q96DF8 476 aaKnown RBP10.41□□□□□ -0.74
HMGN1-208ENST00000443046 ATG5Q9H1Y0 275 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 TMEM140Q9NV12 185 aa10.41□□□□□ -0.74
HMGN1-208ENST00000443046 SULT1C2O00338 296 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 PDCD5O14737 125 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 DFFBO76075 338 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 AMBPP02760 352 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 P0DMU3 169 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 FAM231AP0DMU4 169 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 FAM231CP0DMU5 169 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 RELQ04864 619 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-208ENST00000443046 GBGT1Q8N5D6 347 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 DUSP21Q9H596 190 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 PLEKHA2Q9HB19 425 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 X6R8D5 127 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms