RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PRR31Q5SQ13 230 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 ABI3Q9P2A4 366 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 ICE1Q9Y2F5 2266 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-218ENST00000442625 TCL1AP56279 114 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 RPL31P62899 125 aaKnown RBP11.7□□□□□ -0.54
MCF2L-218ENST00000442625 EDDM3AQ14507 147 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 MIEN1Q9BRT3 115 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 SPRR3Q9UBC9 169 aa11.7□□□□□ -0.54
MCF2L-218ENST00000442625 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 M0QZ24 198 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 ACTL6BO94805 426 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 SP1P08047 785 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 ACP1P24666 158 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 TPPP2P59282 170 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 CATR1Q13166 79 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 TRIP6Q15654 476 aaKnown RBP11.69□□□□□ -0.54
MCF2L-218ENST00000442625 PDLIM3Q53GG5 364 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-218ENST00000442625 UTF1Q5T230 341 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 VAMP8Q9BV40 100 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 PROP1O75360 226 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 TNFSF13O75888 250 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 AGFG2O95081 481 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 FXYD3Q14802 87 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 ZNF766Q5HY98 468 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 Q6ZVH6 145 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 Q8TCH9 128 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 LRFN3Q9BTN0 628 aa11.69□□□□□ -0.54
MCF2L-218ENST00000442625 HEYLQ9NQ87 328 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-218ENST00000442625 RAB29O14966 203 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 MYOD1P15172 320 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 UBE2NP61088 152 aaKnown RBP11.68□□□□□ -0.54
MCF2L-218ENST00000442625 YPEL3P61236 119 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-218ENST00000442625 FOXF2Q12947 444 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 MMDQ15546 238 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 PEAR1Q5VY43 1037 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-218ENST00000442625 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 ST6GALNAC3Q8NDV1 305 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 OR5AU1Q8NGC0 362 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 SPRY4Q9C004 299 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 NCOR1O75376 2440 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 TRAV34A0A0B4J273 112 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 CD99P14209 185 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 IGHV1-2P23083 117 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 CRYBA4P53673 196 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 ARG2P78540 354 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-218ENST00000442625 C1orf159Q96HA4 380 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 RCHY1Q96PM5 261 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 GGTLC1Q9BX51 225 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
MCF2L-218ENST00000442625 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 DOLPP1Q86YN1 238 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 C11orf53Q8IXP5 236 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 ATOH7Q8N100 152 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 CIB3Q96Q77 187 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-218ENST00000442625 GNB4Q9HAV0 340 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 TNCP24821 2201 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 PMCHP20382 165 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 BTF3L4Q96K17 158 aa11.67□□□□□ -0.54
MCF2L-218ENST00000442625 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
MCF2L-218ENST00000442625 CGAP01215 116 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 TM4SF20Q53R12 229 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 A0A1B0GW15 77 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 WISP2O76076 250 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 BRI3O95415 125 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 CEACAM3P40198 252 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 TMEM183BQ1AE95 376 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 FAM19A2Q8N3H0 131 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 IL36BQ9NZH7 164 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 KLRC4-KLRK1H3BQV0 150 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 FABP6P51161 128 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 MMD2Q8IY49 270 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 UBALD2Q8IYN6 164 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
MCF2L-218ENST00000442625 CADP27708 2225 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 LOC105371242A0A075B767 164 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 TRGV5A0A0B4J1U4 118 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 IQCF6A8MYZ5 107 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 GCHFRP30047 84 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 LGALS4P56470 323 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 SLC35E4Q6ICL7 350 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 ACP7Q6ZNF0 438 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 MOB3BQ86TA1 216 aa11.65□□□□□ -0.54
MCF2L-218ENST00000442625 KLF13Q9Y2Y9 288 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms