RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 GABRA2P47869 451 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 ALKBH6Q3KRA9 238 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 ATP1A1-AS1Q5TC04 95 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 C1orf159Q96HA4 380 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 LINC00470Q9BZP3 86 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 SAA2-SAA4A0A096LPE2 208 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 ARR3P36575 388 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 PRAMEF5Q5TYX0 476 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 PRAMEF6Q5VXH4 476 aa16.79■□□□□ 0.28
SHOX2-203ENST00000441443 HELTA6NFD8 242 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 ITGB1BP1O14713 200 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 FCGR3BO75015 233 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 MMP23AO75900 390 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 ZNF146Q15072 292 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 OR1C1Q15619 314 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 TMEM164Q5U3C3 297 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 WDR73Q6P4I2 378 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 SLC35D1Q9NTN3 355 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 SERTAD4Q9NUC0 356 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 TP73-AS1Q9UF72 201 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 TOMM40O96008 361 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 CA1P00915 261 aaPredicted RBP16.78■□□□□ 0.28
SHOX2-203ENST00000441443 CDKN1BP46527 198 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 STUMQ69YW2 141 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 CDC42EP3Q9UKI2 254 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 POLDIP2Q9Y2S7 368 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 TRAV3A0A0B4J244 114 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 MT-ND6P03923 174 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 STPG3Q8N7X2 389 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 OR4C5Q8NGB2 326 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 C11orf52Q96A22 123 aa16.78■□□□□ 0.28
SHOX2-203ENST00000441443 Q6ZR03 302 aa16.77■□□□□ 0.28
SHOX2-203ENST00000441443 ZNF826PQ6ZT77 177 aa16.77■□□□□ 0.28
SHOX2-203ENST00000441443 OR4A16Q8NH70 328 aa16.77■□□□□ 0.28
SHOX2-203ENST00000441443 C12orf49Q9H741 205 aa16.77■□□□□ 0.28
SHOX2-203ENST00000441443 PCSK5Q92824 1860 aa16.77■□□□□ 0.28
SHOX2-203ENST00000441443 IGKV3D-15A0A087WSY6 115 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 K7EP13 123 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 FBLN7Q53RD9 439 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 Q56UQ5 140 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 Q8IYB0 196 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 ZNF439Q8NDP4 499 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 RNF24Q9Y225 148 aa16.77■□□□□ 0.27
SHOX2-203ENST00000441443 HCFC1P51610 2035 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 IGHV2OR16-5A0A0B4J2B6 119 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 IGHV3-13P01766 116 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 IGHV3-7P01780 117 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 RHOBP62745 196 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 FOXF2Q12947 444 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 MIR17HGQ75NE6 70 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 OOEPA6NGQ2 149 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 AHRRA9YTQ3 701 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 PRSS46E5RG02 174 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 MGST1P10620 155 aaKnown RBP16.76■□□□□ 0.27
SHOX2-203ENST00000441443 RELBQ01201 579 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 DCTN5Q9BTE1 182 aa16.76■□□□□ 0.27
SHOX2-203ENST00000441443 M0QZ24 198 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 GFRA3O60609 400 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 PSG5Q15238 335 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 COQ2Q96H96 371 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 MRPS16Q9Y3D3 137 aaKnown RBP16.75■□□□□ 0.27
SHOX2-203ENST00000441443 SLAQ13239 276 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 FAM173AQ9BQD7 235 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 LY96Q9Y6Y9 160 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 IGHV2-26A0A0B4J1V2 119 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 MT-CO2P00403 227 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 APCSP02743 223 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 AMY1AP04745 511 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 RPL19P84098 196 aaKnown RBP16.75■□□□□ 0.27
SHOX2-203ENST00000441443 NHLRC2Q8NBF2 726 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 Q8TCH9 128 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 LOXL4Q96JB6 756 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 NPVFQ9HCQ7 196 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 B4GALT7Q9UBV7 327 aa16.75■□□□□ 0.27
SHOX2-203ENST00000441443 PTPRZ1P23471 2315 aaPredicted RBP16.74■□□□□ 0.27
SHOX2-203ENST00000441443 TNXAQ16473 311 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 PRR31Q5SQ13 230 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 TTTY12Q9BZ98 90 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 DEFB127Q9H1M4 99 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 GCM1Q9NP62 436 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 TNFSF15O95150 251 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 SP9P0CG40 484 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 VDAC2P45880 294 aaPredicted RBP16.74■□□□□ 0.27
SHOX2-203ENST00000441443 C19orf35Q6ZS72 473 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 OR13A1Q8NGR1 328 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 ST6GALNAC6Q969X2 333 aa16.74■□□□□ 0.27
SHOX2-203ENST00000441443 HSD17B10Q99714 261 aaKnown RBP16.74■□□□□ 0.27
SHOX2-203ENST00000441443 SSBP3Q9BWW4 388 aaPredicted RBP16.74■□□□□ 0.27
SHOX2-203ENST00000441443 LAMA5O15230 3695 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 PROP1O75360 226 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 WISP2O76076 250 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 IGLL1P15814 213 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 VAMP3Q15836 100 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 TIGITQ495A1 244 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 MDP1Q86V88 176 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 LSM4Q9Y4Z0 139 aaKnown RBP16.73■□□□□ 0.27
SHOX2-203ENST00000441443 TET2Q6N021 2002 aaPredicted RBP16.73■□□□□ 0.27
SHOX2-203ENST00000441443 DMXL1Q9Y485 3027 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 CELA3BP08861 270 aa16.73■□□□□ 0.27
SHOX2-203ENST00000441443 TMEM251Q8N6I4 163 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms