RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 ERVK-16P61578 105 aa15.29■□□□□ 0.04
NCKIPSD-206ENST00000439518 VBP1P61758 197 aa15.29■□□□□ 0.04
NCKIPSD-206ENST00000439518 CMTM1Q8IZ96 169 aa15.29■□□□□ 0.04
NCKIPSD-206ENST00000439518 GDPD1Q8N9F7 314 aa15.29■□□□□ 0.04
NCKIPSD-206ENST00000439518 ZNF320A2RRD8 509 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 GPR31O00270 319 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 SERPINE2P07093 398 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 WT1-ASQ06250 92 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 HSD17B13Q7Z5P4 300 aaPredicted RBP15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 OR1L8Q8NGR8 309 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 WDR89Q96FK6 387 aaPredicted RBP15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 SCPEP1Q9HB40 452 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 NDUFA4L2Q9NRX3 87 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 THYN1Q9P016 225 aa15.28■□□□□ 0.04
NCKIPSD-206ENST00000439518 KRASP01116 189 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 OR13C7P0DN81 318 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 GPR183P32249 361 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 GUCA2BQ16661 112 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 UNQ9165/PRO28630Q6UXU0 137 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 DEFB125Q8N687 156 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 VN1R17PQ8TDU5 208 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 ISOC1Q96CN7 298 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 MLXQ9UH92 298 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 CEPT1Q9Y6K0 416 aa15.27■□□□□ 0.04
NCKIPSD-206ENST00000439518 SMIM31A0A1B0GVY4 71 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 ELK1P19419 428 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 G6PCP35575 357 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 ZNF57Q68EA5 555 aaPredicted RBP15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 TMEM61Q8N0U2 210 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 UXS1Q8NBZ7 420 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 WFDC10AQ9H1F0 79 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 HIPK2Q9H2X6 1198 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 NSG2Q9Y328 171 aa15.26■□□□□ 0.03
NCKIPSD-206ENST00000439518 RBMY1BA6NDE4 496 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 RBMY1EA6NEQ0 496 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 OR11H12B2RN74 326 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 CYB5BO43169 146 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 HPGDSO60760 199 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 RBMY1DP0C7P1 496 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 C8orf88P0DMB2 117 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 MFAP2P55001 183 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 PHLDA2Q53GA4 152 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 TM4SF20Q53R12 229 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 LPCAT3Q6P1A2 487 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 SNX29P2Q8IUI4 249 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 LSM10Q969L4 123 aaKnown RBP15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 MARC2Q969Z3 335 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 PALMDQ9NP74 551 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 FAM212BQ9NTI7 297 aaPredicted RBP15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 OR51B2Q9Y5P1 312 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 SELENOKQ9Y6D0 94 aa15.25■□□□□ 0.03
NCKIPSD-206ENST00000439518 DYNC2H1Q8NCM8 4307 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 SNAPC5O75971 98 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 IFNA6P05013 189 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 RCVRNP35243 200 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 TSPAN5P62079 268 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 PLET1Q6UQ28 207 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 HINT2Q9BX68 163 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 ZNF436Q9C0F3 470 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 SRD5A3Q9H8P0 318 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 TMEM14BQ9NUH8 114 aa15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 F11RQ9Y624 299 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-206ENST00000439518 IGHV3-35A0A0C4DH35 117 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 TGOLN2O43493 480 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 RORCP51449 518 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 ELLP55199 621 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 UCP3P55916 312 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 ZFAND6Q6FIF0 208 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 SLC25A24Q6NUK1 477 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 BTNL8Q6UX41 500 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 OR5B3Q8NH48 314 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 RETNQ9HD89 108 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 PRNDQ9UKY0 176 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 CSMD3Q7Z407 3707 aa15.23■□□□□ 0.03
NCKIPSD-206ENST00000439518 DBX1A6NMT0 343 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 S100GP29377 79 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 CTF1Q16619 201 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 SLC16A13Q7RTY0 426 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 TBC1D26Q86UD7 250 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 ATP6V0BQ99437 205 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 TSC22D3Q99576 134 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 NAA50Q9GZZ1 169 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 FKBP11Q9NYL4 201 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 MRPL27Q9P0M9 148 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 UFC1Q9Y3C8 167 aa15.22■□□□□ 0.03
NCKIPSD-206ENST00000439518 TRAV25A0A0B4J276 109 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 OR2T8A6NH00 312 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 C15orf61A6NNL5 157 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 IGKV1-39P01597 117 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 IGKV1D-39P04432 117 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 SMIM18P0DKX4 95 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 SLC38A6Q8IZM9 456 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 TMEM190Q8WZ59 177 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 BSCL2Q96G97 398 aaPredicted RBP15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 SEC22AQ96IW7 307 aa15.21■□□□□ 0.03
NCKIPSD-206ENST00000439518 F8W735 103 aaPredicted RBP15.2■□□□□ 0.02
NCKIPSD-206ENST00000439518 K7EIM0 57 aa15.2■□□□□ 0.02
NCKIPSD-206ENST00000439518 M0QYG6 137 aa15.2■□□□□ 0.02
NCKIPSD-206ENST00000439518 SCAF4O95104 1147 aaKnown RBP15.2■□□□□ 0.02
NCKIPSD-206ENST00000439518 GABARAPO95166 117 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms