RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 PPCDCQ96CD2 204 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 LRRC45Q96CN5 670 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 ZNF514Q96K75 400 aaPredicted RBP1.45□□□□□ -2.18
VPS41-207ENST00000439468 CHMP4BQ9H444 224 aaKnown RBP1.45□□□□□ -2.18
VPS41-207ENST00000439468 TUBA4BQ9H853 241 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 EURLQ9NYK6 297 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 TMEM216Q9P0N5 145 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 LINC00527Q9UJ94 153 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 GMEB1Q9Y692 573 aa1.45□□□□□ -2.18
VPS41-207ENST00000439468 MYH8P13535 1937 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 C19orf71A6NCJ1 209 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 METTL15A6NJ78 407 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 LIN7AO14910 233 aaPredicted RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 TOX3O15405 576 aaPredicted RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 OR4A8P0C604 315 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 PSMB6P28072 239 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 CD151P48509 253 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 CDK9P50750 372 aaKnown RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 HES1Q14469 280 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 MRPL51Q4U2R6 128 aaKnown RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 SLC13A5Q86YT5 568 aaPredicted RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 OR7G1Q8NGA0 311 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 OR5K1Q8NHB7 308 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 TRNT1Q96Q11 434 aaKnown RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 C7orf50Q9BRJ6 194 aaKnown RBP1.44□□□□□ -2.18
VPS41-207ENST00000439468 UPK3BQ9BT76 320 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 MED28Q9H204 178 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 HEY1Q9Y5J3 304 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 F5P12259 2224 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 MYH1P12882 1939 aa1.44□□□□□ -2.18
VPS41-207ENST00000439468 ANK1P16157 1881 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 PTPRJQ12913 1337 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.43□□□□□ -2.181e-7■■■■■ 39.2
VPS41-207ENST00000439468 A0A0J9YX75 114 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 DAPL1A0PJW8 107 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 LINC00862A6NCI5 91 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 FABP12A6NFH5 140 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 ODF3BA8MYP8 253 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 FTCDNL1E5RQL4 147 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 GOLGA8RI6L899 631 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 DENRO43583 198 aaKnown RBP1.43□□□□□ -2.18
VPS41-207ENST00000439468 CALUO43852 315 aaPredicted RBP1.43□□□□□ -2.18
VPS41-207ENST00000439468 LY6HO94772 140 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 ORM1P02763 201 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 ZNF7P17097 686 aaPredicted RBP1.43□□□□□ -2.18
VPS41-207ENST00000439468 F8A1P23610 371 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 DAPP51397 102 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 SLC35A2P78381 396 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 DMTNQ08495 405 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 HLA-DRB5Q30154 266 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 ATP5L2Q7Z4Y8 100 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 CCDC112Q8NEF3 446 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 LFNGQ8NES3 379 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 OR11H1Q8NG94 326 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 OR4K13Q8NH42 304 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 GPR119Q8TDV5 335 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 DNAJB3Q8WWF6 145 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 RBP7Q96R05 134 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 METTL9Q9H1A3 318 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 GLS2Q9UI32 602 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 CCL26Q9Y258 94 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 WNK1Q9H4A3 2382 aa1.43□□□□□ -2.18
VPS41-207ENST00000439468 CSMD3Q7Z407 3707 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 CHD3Q12873 2000 aaKnown RBP1.42□□□□□ -2.18
VPS41-207ENST00000439468 ANK3Q12955 4377 aaKnown RBP1.42□□□□□ -2.18
VPS41-207ENST00000439468 ESPL1Q14674 2120 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 MYO5AQ9Y4I1 1855 aaKnown RBP1.42□□□□□ -2.18
VPS41-207ENST00000439468 H3BSA7 217 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 AZIN1O14977 448 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 COCHO43405 550 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 TRAPPC3O43617 180 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 HBZP02008 142 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 P0DMU3 169 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 FAM231AP0DMU4 169 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 FAM231CP0DMU5 169 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 ESDP10768 282 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 CXCL2P19875 107 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 CXCL3P19876 107 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 CDK2P24941 298 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 AGTR1P30556 359 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 HOXA6P31267 233 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 CRATP43155 626 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 KRTAP12-1P59990 96 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 DNAL1Q4LDG9 190 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 SPIN4Q56A73 249 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 Q6ZS52 159 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 SPATA24Q86W54 205 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 PLCZ1Q86YW0 608 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 OR4C16Q8NGL9 310 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 OR10A6Q8NH74 314 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 ERMNQ8TAM6 284 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 STOML3Q8TAV4 291 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 SMIM12Q96EX1 92 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 ACY3Q96HD9 319 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 C1QTNF6Q9BXI9 259 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 WDR54Q9H977 334 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 SNX10Q9Y5X0 201 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 KNTC1P50748 2209 aa1.42□□□□□ -2.18
VPS41-207ENST00000439468 DOCK5Q9H7D0 1870 aa1.41□□□□□ -2.18
VPS41-207ENST00000439468 TRGV4A0A0C4DH28 118 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms