RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PARP11Q9NR21 331 aa10.01□□□□□ -0.81
SCLT1-202ENST00000439369 hCG_2014768A0A024R1R8 64 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 A0A1B0GVG6 124 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 CEBPZOSA8MTT3 80 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 WRBO00258 174 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 ATP6V0E1O15342 81 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 BRI3O95415 125 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 RLN2P04090 185 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 EGR2P11161 476 aaPredicted RBP10□□□□□ -0.81
SCLT1-202ENST00000439369 PSMB6P28072 239 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 HOXA1P49639 335 aaPredicted RBP10□□□□□ -0.81
SCLT1-202ENST00000439369 ERHP84090 104 aaKnown RBP10□□□□□ -0.81
SCLT1-202ENST00000439369 C19orf54Q5BKX5 351 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 Q6ZSV7 163 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 OR1L6Q8NGR2 347 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 DTD1Q8TEA8 209 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 ABHD5Q8WTS1 349 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 HIPK2Q9H2X6 1198 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 RBKSQ9H477 322 aa10□□□□□ -0.81
SCLT1-202ENST00000439369 TRAV41A0A0B4J266 112 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 A0A1B0GW64 132 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 K7EPK0 472 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 CYB5BO43169 146 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 SCAF4O95104 1147 aaKnown RBP9.99□□□□□ -0.81
SCLT1-202ENST00000439369 CRYGCP07315 174 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 MYOD1P15172 320 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 PVALBP20472 110 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-202ENST00000439369 VDAC2P45880 294 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-202ENST00000439369 RAB32Q13637 225 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 ARSJQ5FYB0 599 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-202ENST00000439369 NOXA1Q86UR1 476 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 TTC9CQ8N5M4 171 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 OR2C3Q8N628 320 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 ZNF114Q8NC26 417 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 OR4F5Q8NH21 305 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 PPP1R1CQ8WVI7 109 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 SMIM8Q96KF7 97 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 HINT2Q9BX68 163 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 HEYLQ9NQ87 328 aaPredicted RBP9.99□□□□□ -0.81
SCLT1-202ENST00000439369 FBXO7Q9Y3I1 522 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 WSB1Q9Y6I7 421 aa9.99□□□□□ -0.81
SCLT1-202ENST00000439369 A0A1B0GUS0 222 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 TMEM89A2RUT3 159 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 SH2D7A6NKC9 451 aaPredicted RBP9.98□□□□□ -0.81
SCLT1-202ENST00000439369 E7EUB6 86 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 H3BUA1 57 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 DEDDO75618 318 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 CCNKO75909 580 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 MPC2O95563 127 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 SCGB1D2O95969 90 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 OPN1MWP04001 364 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 OPN1MW2P0DN77 364 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 OPN1MW3P0DN78 364 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 HTR2BP41595 481 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 SUB1P53999 127 aaKnown RBP eCLIP9.98□□□□□ -0.815e-7■■■■■ 33
SCLT1-202ENST00000439369 POLR2GP62487 172 aaKnown RBP eCLIP9.98□□□□□ -0.81
SCLT1-202ENST00000439369 RPP30P78346 268 aaKnown RBP9.98□□□□□ -0.81
SCLT1-202ENST00000439369 WT1-ASQ06250 92 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 KLK9Q2XQG4 91 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 BSXQ3C1V8 233 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 Q6ZS46 218 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 AKAP14Q86UN6 197 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 TCTE3Q8IZS6 198 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 STPG2Q8N412 459 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
SCLT1-202ENST00000439369 KLK9Q9UKQ9 250 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 RCL1Q9Y2P8 373 aaKnown RBP9.98□□□□□ -0.81
SCLT1-202ENST00000439369 U3KQ87 197 aa9.98□□□□□ -0.81
SCLT1-202ENST00000439369 LINC01548A6NM66 108 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 E5RGE8 158 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 L7N2F9 121 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 SSSCA1O60232 199 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 TSC22D2O75157 780 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 OR13C7P0DN81 318 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 HKR1P10072 659 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 LYL1P12980 280 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 CTRB1P17538 263 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 PPIFP30405 207 aaKnown RBP9.97□□□□□ -0.81
SCLT1-202ENST00000439369 SNCAP37840 140 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 S100A10P60903 97 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 RPL23AP62750 156 aaKnown RBP9.97□□□□□ -0.81
SCLT1-202ENST00000439369 VAMP2P63027 116 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 SLC35B1P78383 322 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 CD83Q01151 205 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 CFHR3Q02985 330 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 ASPHD1Q5U4P2 390 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 PVRIGQ6DKI7 326 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 CTRB2Q6GPI1 263 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 PRSS54Q6PEW0 395 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 UNQ5815/PRO19632Q6UWF5 114 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 COMMD1Q8N668 190 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 LFNGQ8NES3 379 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 OR10W1Q8NGF6 305 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 OR2T35Q8NGX2 323 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 THAP6Q8TBB0 222 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 FAM103A1Q9BTL3 118 aaKnown RBP9.97□□□□□ -0.81
SCLT1-202ENST00000439369 WNT10AQ9GZT5 417 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 MAGT1Q9H0U3 335 aa9.97□□□□□ -0.81
SCLT1-202ENST00000439369 C11orf1Q9H5F2 150 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms