RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CLEC3BP05452 202 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 CRYGCP07315 174 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 NQO2P16083 231 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 FGF9P31371 208 aaPredicted RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 SCAND1P57086 179 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 MXD1Q05195 221 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 PMS2P11Q13670 270 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 MSMO1Q15800 293 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 ZNF585BQ52M93 769 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 THOC7Q6I9Y2 204 aaKnown RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 LINC00322Q6ZN03 302 aaPredicted RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 TMEM17Q86X19 198 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 ZBTB34Q8NCN2 500 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 TSPAN14Q8NG11 270 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 OR51H1Q8NH63 302 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 SRSF8Q9BRL6 282 aaKnown RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 HINT2Q9BX68 163 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 QTRT1Q9BXR0 403 aaKnown RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 C6orf62Q9GZU0 229 aaPredicted RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 IFT46Q9NQC8 304 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 DIABLOQ9NR28 239 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 TXNL4BQ9NX01 149 aaKnown RBP5.83□□□□□ -1.48
VPS50-204ENST00000438395 PRR13Q9NZ81 148 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 RAB26Q9ULW5 256 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 SELENOKQ9Y6D0 94 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
VPS50-204ENST00000438395 IGLV11-55A0A075B6I3 123 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 A0A0A6YYH2 397 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 IGHV3-35A0A0C4DH35 117 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 LOC100506127A0A0U1RQW1 187 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 NUPR2A6NF83 97 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 MFSD2BA6NFX1 497 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 OR4C46A6NHA9 309 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 A6NJ64 397 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 SSX5O60225 188 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 SNAPC5O75971 98 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 FCER2P06734 321 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 CTRB1P17538 263 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 S100GP29377 79 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 CBX5P45973 191 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 TAS2R31P59538 309 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 OR2B8PP59922 312 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 TM4SF20Q53R12 229 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 IDNKQ5T6J7 187 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 UBE2UQ5VVX9 321 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 CTRB2Q6GPI1 263 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 LAMTOR1Q6IAA8 161 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 HSD17B13Q7Z5P4 300 aaPredicted RBP5.82□□□□□ -1.48
VPS50-204ENST00000438395 NR2C2APQ86WQ0 139 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 TMEM217Q8N7C4 229 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 GPHA2Q96T91 129 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 SPAG8Q99932 426 aaPredicted RBP5.82□□□□□ -1.48
VPS50-204ENST00000438395 C20orf24Q9BUV8 137 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 DAZ1Q9NQZ3 744 aaKnown RBP5.82□□□□□ -1.48
VPS50-204ENST00000438395 CCL28Q9NRJ3 127 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 TMEM140Q9NV12 185 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 COMMD9Q9P000 198 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 MRPL27Q9P0M9 148 aaKnown RBP5.82□□□□□ -1.48
VPS50-204ENST00000438395 MLXQ9UH92 298 aa5.82□□□□□ -1.48
VPS50-204ENST00000438395 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
VPS50-204ENST00000438395 IGLC7A0M8Q6 106 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 TGOLN2O43493 480 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 HPRT1P00492 218 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 IGLV2-14P01704 120 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 TRAPPC2P0DI81 140 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 TRAPPC2BP0DI82 140 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 OR13C7P0DN81 318 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 RPA2P15927 270 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 EDN2P20800 178 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 PTBP1P26599 531 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS50-204ENST00000438395 SDC2P34741 201 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 ELLP55199 621 aaPredicted RBP5.81□□□□□ -1.48
VPS50-204ENST00000438395 UNQ9165/PRO28630Q6UXU0 137 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 HOGA1Q86XE5 327 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 CMTM1Q8IZ96 169 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 OR2C3Q8N628 320 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 GVQW1Q8N7I0 195 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 STPG3Q8N7X2 389 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 GDPD1Q8N9F7 314 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 UBAC2Q8NBM4 344 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 OR1L8Q8NGR8 309 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 ZNF502Q8TBZ5 544 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 VN1R17PQ8TDU5 208 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 PLEKHA2Q9HB19 425 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 EHFQ9NZC4 300 aa5.81□□□□□ -1.48
VPS50-204ENST00000438395 KLK5Q9Y337 293 aaPredicted RBP5.81□□□□□ -1.48
VPS50-204ENST00000438395 A0A1B0GW64 132 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 OR2T8A6NH00 312 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 MARCH11A6NNE9 402 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 E7EUB6 86 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 UPK2O00526 184 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 UBE2CO00762 179 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 SPRY2O43597 315 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 S1PR2O95136 353 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 LY6G6CO95867 125 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 RLN1P04808 185 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 FGF2P09038 288 aa5.8□□□□□ -1.48
VPS50-204ENST00000438395 BMI1P35226 326 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms